Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   Q7651_RS11055 Genome accession   NZ_CP131622
Coordinates   2093969..2094937 (-) Length   322 a.a.
NCBI ID   WP_050159090.1    Uniprot ID   -
Organism   Neisseria gonorrhoeae strain 2020N07-265     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2088969..2099937
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7651_RS11030 (Q7651_11145) - 2089511..2090818 (-) 1308 WP_047924793.1 YadA-like family protein -
  Q7651_RS11035 (Q7651_11150) - 2090804..2091457 (+) 654 WP_012503397.1 IS1595 family transposase -
  Q7651_RS11040 (Q7651_11155) - 2091492..2092250 (-) 759 WP_003687045.1 ABC transporter ATP-binding protein -
  Q7651_RS11045 (Q7651_11160) - 2092334..2092960 (-) 627 WP_003690385.1 FmdE family protein -
  Q7651_RS11050 (Q7651_11165) - 2093005..2093979 (-) 975 WP_048339652.1 iron chelate uptake ABC transporter family permease subunit -
  Q7651_RS11055 (Q7651_11170) ceuB 2093969..2094937 (-) 969 WP_050159090.1 ABC transporter permease Machinery gene
  Q7651_RS11060 (Q7651_11175) - 2094956..2095147 (-) 192 WP_162098110.1 hypothetical protein -
  Q7651_RS11065 (Q7651_11180) - 2095165..2096130 (-) 966 WP_003696524.1 siderophore ABC transporter substrate-binding protein -
  Q7651_RS11070 (Q7651_11185) fetA 2096282..2098423 (-) 2142 WP_341948091.1 TonB-dependent siderophore receptor FetA/FrpB -
  Q7651_RS11075 (Q7651_11190) - 2098930..2099220 (+) 291 WP_003687059.1 co-chaperone GroES -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 34388.65 Da        Isoelectric Point: 10.5988

>NTDB_id=789507 Q7651_RS11055 WP_050159090.1 2093969..2094937(-) (ceuB) [Neisseria gonorrhoeae strain 2020N07-265]
MTAKPFSLNLANLLLPAVLFAVSLSVGVADFRWSDVFSLSDSQQVMFISRLPRTFAIVLTGSSMAVAGMIMQILMRNRFV
EPSMAGAGQSAALGLLLMSLLLPAAPLPVKMSVAAVAALIGMLVFMLLIRRLPPTAQLMVPLVGIIFGGVVEAVATFIAY
KNEMLQMLGVWQQGDFSSVLLGRYELLWITGGLAVFAYLIADRLTILGLGETVSVNLGLNRTAVLWSGLIIVALITSLVI
VTVGNIPFVGLVVPNIVSRLTGDRLRQSLPAVALLGASMVLLCDILGRMIVFPFEIPVSTVFGVLGTALFLWLLLRKPAH
AV

Nucleotide


Download         Length: 969 bp        

>NTDB_id=789507 Q7651_RS11055 WP_050159090.1 2093969..2094937(-) (ceuB) [Neisseria gonorrhoeae strain 2020N07-265]
ATGACTGCCAAACCTTTTTCCCTCAACCTGGCCAACCTCCTGCTGCCGGCGGTGTTGTTTGCCGTCAGCCTGTCGGTCGG
CGTTGCCGATTTCCGCTGGTCGGATGTGTTTTCGCTGTCCGACAGCCAGCAAGTGATGTTCATCAGCCGCCTGCCGCGCA
CGTTTGCGATTGTGTTGACGGGCTCGTCGATGGCGGTGGCGGGGATGATTATGCAGATTCTGATGCGCAACCGTTTTGTC
GAGCCTTCTATGGCGGGTGCGGGCCAAAGTGCGGCTTTGGGTTTGCTTCTGATGTCCCTGCTGCTGCCTGCCGCGCCGCT
GCCGGTCAAAATGTCGGTTGCCGCCGTTGCCGCGCTGATCGGGATGTTGGTCTTTATGCTGCTGATCCGCCGCCTGCCGC
CGACGGCGCAACTGATGGTGCCGCTGGTGGGGATTATTTTCGGCGGCGTGGTTGAGGCGGTGGCGACGTTTATCGCGTAT
AAAAACGAAATGCTGCAAATGCTCGGCGTGTGGCAGCAGGGCGACTTTTCAAGCGTGCTGCTGGGGCGGTACGAGCTGCT
TTGGATTACGGGCGGTTTGGCGGTGTTTGCCTACCTGATTGCCGACCGGCTGACGATTTTGGGGCTGGGCGAAACGGTGA
GCGTGAATTTGGGTTTGAACCGGACGGCGGTGTTGTGGTCGGGTTTGATTATTGTGGCACTGATTACATCGCTGGTCATT
GTAACGGTCGGCAATATTCCGTTTGTCGGGCTGGTCGTGCCGAATATCGTCAGCCGCCTGACGGGCGACAGGCTGCGCCA
AAGCCTGCCTGCGGTCGCCCTCTTGGGCGCGTCTATGGTGCTGCTGTGCGATATTTTGGGACGCATGATTGTGTTTCCGT
TTGAAATTCCGGTCTCTACGGTTTTTGGTGTGTTGGGTACGGCTTTGTTTTTGTGGCTTTTATTAAGGAAACCTGCCCAT
GCCGTCTGA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(17-316)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

41.528

93.478

0.388