Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   PUW62_RS02735 Genome accession   NZ_CP118046
Coordinates   548849..549904 (+) Length   351 a.a.
NCBI ID   WP_024052081.1    Uniprot ID   A0A413KQY5
Organism   Streptococcus anginosus strain VSI52     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 543849..554904
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW62_RS02705 (PUW62_02705) - 544370..545005 (-) 636 WP_024052085.1 YigZ family protein -
  PUW62_RS02710 (PUW62_02710) comFA/cflA 545062..546363 (+) 1302 WP_070241559.1 DEAD/DEAH box helicase Machinery gene
  PUW62_RS02715 (PUW62_02715) comFC/cflB 546360..547025 (+) 666 WP_024052083.1 ComF family protein Machinery gene
  PUW62_RS02720 (PUW62_02720) raiA 547103..547645 (+) 543 WP_003025754.1 ribosome-associated translation inhibitor RaiA -
  PUW62_RS02725 (PUW62_02725) rsmD 547833..548381 (+) 549 WP_171021853.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  PUW62_RS02730 (PUW62_02730) coaD 548371..548868 (+) 498 WP_021001374.1 pantetheine-phosphate adenylyltransferase -
  PUW62_RS02735 (PUW62_02735) sepM 548849..549904 (+) 1056 WP_024052081.1 SepM family pheromone-processing serine protease Regulator
  PUW62_RS02740 (PUW62_02740) - 550043..550606 (+) 564 WP_274997440.1 YutD-like domain-containing protein -
  PUW62_RS02745 (PUW62_02745) rlmN 550647..551729 (+) 1083 WP_024052079.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  PUW62_RS02750 (PUW62_02750) - 551722..552252 (+) 531 WP_024052078.1 VanZ family protein -
  PUW62_RS02755 (PUW62_02755) trpB 552613..553821 (+) 1209 Protein_502 tryptophan synthase subunit beta -
  PUW62_RS02760 (PUW62_02760) cclA/cilC 553982..554641 (-) 660 WP_024052075.1 A24 family peptidase Machinery gene

Sequence


Protein


Download         Length: 351 a.a.        Molecular weight: 38290.25 Da        Isoelectric Point: 10.1906

>NTDB_id=789461 PUW62_RS02735 WP_024052081.1 548849..549904(+) (sepM) [Streptococcus anginosus strain VSI52]
MEKPRNKFKKWPIIAVVGVILLFLSFVVPLPYYIEVPGGAADVRQVLRVDNKEDKEKGSYNFVTVGIQHATLAHLVYAWL
TPFTDIYSAKDLTGGTSDKEYMRINQFYMETSQNLAKYQGLKKAGKDITLKYLGVYVLQVTKNSTFKGILNIADTVTGVN
DKTFNSSKELIDYVGAQKIGSKVKVNYVEDGQKKSATGKIIKLENGKNGIGISLIDRTEVTSNTPIEFSTAGIGGPSAGL
MFSLAIYTQIADPTLRDGRNIAGTGSIDREGKVGDIGGIDKKVVSAAKNGAEIFFAPNNPVTKEVKKSNPKAKTNYETAL
AAAKKIKTKMKIVPVKTLQDAIDYLKSTKKS

Nucleotide


Download         Length: 1056 bp        

>NTDB_id=789461 PUW62_RS02735 WP_024052081.1 548849..549904(+) (sepM) [Streptococcus anginosus strain VSI52]
ATGGAAAAACCAAGAAATAAATTTAAAAAATGGCCGATAATTGCAGTAGTAGGGGTGATTTTGCTTTTCTTATCTTTTGT
AGTTCCCTTGCCTTATTATATTGAGGTGCCAGGTGGTGCAGCGGATGTCCGTCAGGTATTGCGCGTGGACAACAAAGAAG
ATAAGGAAAAAGGTTCTTATAATTTTGTAACGGTTGGAATTCAGCATGCGACCCTCGCTCATTTGGTTTATGCTTGGCTG
ACACCTTTTACGGATATTTATTCGGCGAAGGATTTGACTGGTGGAACTTCTGATAAAGAATACATGCGGATCAATCAGTT
TTATATGGAAACGTCGCAAAACCTAGCTAAATACCAAGGGTTGAAAAAAGCTGGCAAAGACATTACTCTGAAATATCTAG
GGGTTTACGTCTTGCAAGTCACAAAGAATTCTACTTTTAAAGGTATTTTAAATATTGCAGATACCGTGACAGGTGTGAAT
GATAAGACTTTCAATAGTTCAAAAGAATTGATAGACTATGTCGGAGCGCAAAAGATTGGCAGCAAGGTCAAGGTGAACTA
TGTAGAAGACGGTCAGAAGAAGTCTGCTACAGGTAAAATTATTAAACTTGAAAATGGGAAAAACGGGATTGGCATTAGTT
TGATTGACCGAACAGAAGTCACAAGCAACACACCAATTGAATTTTCAACTGCCGGTATTGGTGGACCAAGTGCGGGCTTG
ATGTTTAGTTTGGCAATTTATACGCAAATTGCAGATCCAACATTGAGAGACGGCAGAAATATTGCTGGGACAGGTTCGAT
TGACCGAGAAGGAAAAGTTGGCGACATTGGTGGGATTGACAAAAAAGTTGTTTCAGCAGCTAAAAATGGCGCAGAAATTT
TCTTTGCGCCAAATAATCCAGTCACCAAGGAAGTGAAAAAATCCAATCCTAAAGCGAAAACAAACTATGAGACAGCTTTG
GCAGCTGCTAAAAAAATTAAAACTAAAATGAAAATTGTACCTGTCAAGACCTTGCAAGACGCAATTGATTACCTCAAGAG
CACAAAAAAGTCGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A413KQY5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

64.223

97.151

0.624