Detailed information NTG0789198

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PUO32_RS04630
• Genome accession: NZ_CP118025
• Coordinates: 928201..929304 (-)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis strain
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 923201..934304

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PUO32_RS04600 (PUO32_04600)	-	923234..924185 (+)	952	Protein_899	IS481-like element IS481 family transposase	-
PUO32_RS04605 (PUO32_04605)	-	924179..924664 (+)	486	Protein_900	phosphonate ABC transporter ATP-binding protein	-
PUO32_RS04610 (PUO32_04610)	phnE	924682..925551 (+)	870	WP_023998122.1	phosphonate ABC transporter, permease protein PhnE	-
PUO32_RS04615 (PUO32_04615)	phnE	925548..926369 (+)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
PUO32_RS04625 (PUO32_04625)	-	926556..928154 (+)	1599	Protein_903	CYTH and CHAD domain-containing protein	-
PUO32_RS04630 (PUO32_04630)	pilA	928201..929304 (-)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
PUO32_RS04635 (PUO32_04635)	rsmD	929380..930000 (+)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PUO32_RS04640 (PUO32_04640)	coaD	930021..930530 (+)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
PUO32_RS04645 (PUO32_04645)	-	930585..930836 (+)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
PUO32_RS04650 (PUO32_04650)	-	930900..932033 (+)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
PUO32_RS04655 (PUO32_04655)	-	932041..932427 (-)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=789198 PUO32_RS04630 WP_023853086.1 928201..929304(-) (pilA) [Bordetella pertussis strain]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=789198 PUO32_RS04630 WP_023853086.1 928201..929304(-) (pilA) [Bordetella pertussis strain]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507