Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   PT671_RS02350 Genome accession   NZ_CP118021
Coordinates   552454..552918 (+) Length   154 a.a.
NCBI ID   WP_003218659.1    Uniprot ID   E0U3A0
Organism   Bacillus spizizenii strain B-354     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 547454..557918
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PT671_RS02330 fadH 548642..549406 (-) 765 WP_003218667.1 2,4-dienoyl-CoA reductase -
  PT671_RS02335 - 549548..550408 (+) 861 WP_003218664.1 metallophosphoesterase -
  PT671_RS02340 - 550466..550960 (+) 495 WP_079996611.1 L,D-transpeptidase family protein -
  PT671_RS02345 - 551036..552328 (+) 1293 WP_003218661.1 MFS transporter -
  PT671_RS02350 kre 552454..552918 (+) 465 WP_003218659.1 YkyB family protein Regulator
  PT671_RS02355 cheV 552960..553871 (-) 912 WP_003218657.1 chemotaxis protein CheV -
  PT671_RS02360 - 554078..554239 (+) 162 WP_003218655.1 hypothetical protein -
  PT671_RS02365 - 554441..555622 (+) 1182 WP_003218653.1 aminotransferase A -
  PT671_RS02370 kinA 555632..557452 (-) 1821 WP_003218651.1 sporulation histidine kinase KinA -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17894.76 Da        Isoelectric Point: 10.4658

>NTDB_id=789124 PT671_RS02350 WP_003218659.1 552454..552918(+) (kre) [Bacillus spizizenii strain B-354]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQKYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=789124 PT671_RS02350 WP_003218659.1 552454..552918(+) (kre) [Bacillus spizizenii strain B-354]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTGTTGCAAAAATATGTGGGCATGAAAGAAAAACCGCTTGTGC
CAAATCGCCAGCAGCCAGCTTATCATAAACCTGTTTTTAAAAAGCTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB E0U3A0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

99.351

100

0.994