Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilZ   Type   Machinery gene
Locus tag   Q7J92_RS10345 Genome accession   NZ_CP130957
Coordinates   2218048..2218404 (+) Length   118 a.a.
NCBI ID   WP_003091119.1    Uniprot ID   A0A0H2ZD30
Organism   Pseudomonas aeruginosa strain CUVET23-830     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2213048..2223404
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7J92_RS10320 (Q7J92_10320) fabF 2213260..2214504 (+) 1245 WP_003104132.1 beta-ketoacyl-ACP synthase II -
  Q7J92_RS10325 (Q7J92_10325) pabC 2214504..2215319 (+) 816 WP_003091129.1 aminodeoxychorismate lyase -
  Q7J92_RS10330 (Q7J92_10330) mltG 2215325..2216374 (+) 1050 WP_003091127.1 endolytic transglycosylase MltG -
  Q7J92_RS10335 (Q7J92_10335) tmk 2216403..2217035 (+) 633 WP_003091125.1 dTMP kinase -
  Q7J92_RS10340 (Q7J92_10340) - 2217028..2218014 (+) 987 WP_003091122.1 DNA polymerase III subunit delta' -
  Q7J92_RS10345 (Q7J92_10345) pilZ 2218048..2218404 (+) 357 WP_003091119.1 PilZ domain-containing protein Machinery gene
  Q7J92_RS10350 (Q7J92_10350) - 2218419..2219195 (+) 777 WP_003091117.1 TatD family hydrolase -
  Q7J92_RS10355 (Q7J92_10355) - 2219421..2220554 (-) 1134 WP_003091115.1 aminotransferase class V-fold PLP-dependent enzyme -
  Q7J92_RS10360 (Q7J92_10360) - 2220640..2221278 (+) 639 WP_003091114.1 TetR/AcrR family transcriptional regulator -
  Q7J92_RS10365 (Q7J92_10365) - 2221428..2221550 (+) 123 Protein_2048 radical SAM protein -
  Q7J92_RS10370 (Q7J92_10370) gmtY 2221708..2223090 (+) 1383 WP_075117044.1 gamma-mobile-trio recombinase GmtY -

Sequence


Protein


Download         Length: 118 a.a.        Molecular weight: 12903.98 Da        Isoelectric Point: 9.9969

>NTDB_id=788992 Q7J92_RS10345 WP_003091119.1 2218048..2218404(+) (pilZ) [Pseudomonas aeruginosa strain CUVET23-830]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM

Nucleotide


Download         Length: 357 bp        

>NTDB_id=788992 Q7J92_RS10345 WP_003091119.1 2218048..2218404(+) (pilZ) [Pseudomonas aeruginosa strain CUVET23-830]
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTTTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTTGGCGACGAGGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCTCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA

Domains


Predicted by InterProScan.

(17-106)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2ZD30

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

49.074

91.525

0.449

  pilZ Legionella pneumophila strain ERS1305867

49.074

91.525

0.449