Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   PUN35_RS20625 Genome accession   NZ_CP117986
Coordinates   3852657..3854969 (+) Length   770 a.a.
NCBI ID   WP_014480703.1    Uniprot ID   -
Organism   Bacillus sp. N3378-2at     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3847657..3859969
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUN35_RS20595 pdeH 3849196..3850425 (+) 1230 WP_014480707.1 cyclic di-GMP phosphodiesterase -
  PUN35_RS20600 - 3850401..3850769 (-) 369 WP_014477834.1 hypothetical protein -
  PUN35_RS20605 - 3850883..3851008 (-) 126 WP_003228793.1 hypothetical protein -
  PUN35_RS20610 degQ 3851230..3851370 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  PUN35_RS20615 - 3851555..3852418 (+) 864 WP_014480705.1 polyprenyl synthetase family protein -
  PUN35_RS20620 comX 3852420..3852641 (+) 222 WP_014480704.1 competence pheromone ComX -
  PUN35_RS20625 comP 3852657..3854969 (+) 2313 WP_014480703.1 sensor histidine kinase Regulator
  PUN35_RS20630 comA 3855050..3855694 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  PUN35_RS20635 - 3855713..3856093 (+) 381 WP_017695528.1 hotdog fold thioesterase -
  PUN35_RS20640 mnhG 3856132..3856506 (-) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  PUN35_RS20645 - 3856490..3856774 (-) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  PUN35_RS20650 - 3856774..3857250 (-) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  PUN35_RS20655 - 3857256..3858737 (-) 1482 WP_033881486.1 Na+/H+ antiporter subunit D -
  PUN35_RS20660 - 3858730..3859071 (-) 342 WP_014480700.1 Na(+)/H(+) antiporter subunit C -
  PUN35_RS20665 - 3859071..3859502 (-) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -

Sequence

Protein


Download         Length: 770 a.a.        Molecular weight: 89648.90 Da        Isoelectric Point: 8.3765

>NTDB_id=788936 PUN35_RS20625 WP_014480703.1 3852657..3854969(+) (comP) [Bacillus sp. N3378-2at]
MYRYINVYKYLSLVFIILSFIYVIYLSYSFAFNIFVGADVKINEQGKLEVTNVLDYTDEYYSCVKKGDIILEVNGEKGSD
IQLKSGRLVNVESLIVERDNKSFHLQNVSLISEENLFMYLIPVISYSICLFCIFFIYRINKVRKSTSAYILILFLLFVSV
AYVSACGARRGEEISTYLLVLTLVSCPVLYIHFIYKYFIELGTKLFEKKILIIMYMLPLINLLLEDVLSNRLKSSAFLSN
LNLISFFVLVLTVSILIHKGIRKFKQKEQKSILKVLAYTNIFSFSPFIVFFAVPYVFFEKYVSPFSLAAFTLVIPFSLVY
QFMTNRLYNIDFVVGRLKYYGFLAITPTIIVVTIFNYIQQPKDIFYLVKLTIAIYVLMFAVFYFKEIIDFRFKLKRFTEK
FNYQDGIFKFTQLIKQASSVDQVLNHFKNTILEVLNIDNACVYDNSKGEITLLSKNNFKDLTYKNHEQYVKNFSGDIGKI
KEFKQGFIIKIGERGDRSFLVLCFSSYNTFKLTRDEIAWLQTLAFYTNVSLENVMKIEELMVHLEDLKQQESNPVWLKKL
MYTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKGDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLY
DLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDD
GVGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=788936 PUN35_RS20625 WP_014480703.1 3852657..3854969(+) (comP) [Bacillus sp. N3378-2at]
ATGTACAGATATATTAACGTCTATAAATATTTGTCTCTAGTTTTTATCATTTTAAGTTTTATTTATGTTATATACCTCTC
GTATAGCTTTGCTTTTAACATCTTCGTAGGTGCGGATGTAAAGATAAATGAACAGGGTAAGTTAGAGGTCACCAATGTTT
TAGATTATACAGATGAATATTATTCATGTGTGAAAAAGGGAGATATCATTCTTGAAGTAAATGGGGAGAAAGGCAGTGAT
ATTCAATTAAAAAGTGGAAGATTGGTCAATGTAGAAAGTTTAATTGTTGAGAGAGATAATAAATCATTTCATTTACAAAA
TGTAAGCCTAATCAGTGAAGAAAATTTATTTATGTATCTCATTCCTGTAATATCTTATTCAATCTGTTTATTTTGTATAT
TTTTTATTTATAGAATAAATAAAGTAAGAAAATCAACTTCTGCTTATATTTTAATTTTATTTTTGTTATTTGTATCAGTA
GCGTATGTAAGTGCATGTGGAGCAAGAAGAGGTGAAGAGATAAGCACTTATCTGCTTGTTCTTACTTTAGTCAGTTGTCC
GGTGTTATATATTCATTTTATATATAAATACTTTATAGAATTAGGAACAAAGTTATTCGAAAAGAAGATTTTAATCATTA
TGTATATGCTCCCGCTAATAAATCTTTTATTAGAGGACGTTCTGAGTAATAGATTAAAATCTTCGGCTTTTTTGTCTAAT
CTGAATTTGATTTCATTTTTTGTCCTAGTTCTTACTGTATCGATTCTTATCCATAAAGGGATAAGAAAATTTAAACAAAA
AGAGCAAAAGTCAATTTTGAAAGTCCTTGCTTATACAAATATCTTTTCTTTCAGTCCGTTTATTGTCTTTTTTGCTGTTC
CATATGTGTTTTTCGAGAAGTATGTCTCACCTTTTAGTTTGGCTGCTTTTACACTTGTTATACCTTTTTCTTTAGTATAT
CAATTTATGACTAATAGACTTTATAATATCGACTTTGTTGTGGGGCGGCTTAAGTACTACGGTTTTTTAGCCATTACACC
TACTATTATCGTAGTGACCATCTTTAATTACATTCAGCAACCAAAGGATATCTTTTATTTAGTTAAACTAACAATTGCAA
TATATGTTCTTATGTTTGCCGTTTTTTACTTTAAAGAAATCATTGATTTTCGTTTCAAGTTGAAAAGATTTACAGAGAAA
TTTAATTATCAAGATGGGATTTTTAAATTTACTCAGTTGATTAAGCAAGCATCATCAGTAGATCAAGTACTTAATCACTT
TAAAAATACAATCCTAGAAGTATTAAACATAGATAATGCTTGCGTGTATGATAATTCTAAAGGGGAAATCACCCTTCTTA
GTAAGAACAACTTTAAAGATCTGACTTATAAAAATCATGAGCAATATGTGAAAAATTTTTCTGGTGATATCGGTAAAATT
AAAGAGTTTAAACAAGGTTTTATTATTAAAATAGGTGAACGAGGAGACAGATCATTTTTAGTACTCTGTTTCTCAAGTTA
TAATACTTTTAAGTTAACAAGGGATGAAATTGCATGGCTTCAAACATTAGCATTTTATACAAATGTCTCATTGGAAAACG
TTATGAAAATCGAAGAATTGATGGTGCATCTTGAGGATTTAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTC
ATGTACACGATCGAGGAAAAACAACGCTCGGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTT
AAAACGCCAGTGTGAGCTGTTTTTGGGTGATTTTAAGAAGGGTGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTG
TACAGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTAT
GATCTTGGGCTGGTCAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATAC
CGGGAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGG
TCAAGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGATGAT
GGCGTAGGATTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGC
TTTAGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(680-766)

Histidine kinase (HisKA_3)

(569-639)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

55.917

99.87

0.558