Detailed information NTG0788928

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: PUN35_RS17965
• Genome accession: NZ_CP117986
• Coordinates: 3361020..3362177 (+)
• Length: 385 a.a.
• NCBI ID: WP_003227983.1
• Uniprot ID: A0A199WDV9
• Organism: Bacillus sp. N3378-2at
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3356020..3367177

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PUN35_RS17935	-	3356234..3357013 (-)	780	WP_014481059.1	hypothetical protein	-
PUN35_RS17940	-	3357089..3357541 (-)	453	WP_014481058.1	hypothetical protein	-
PUN35_RS17945	-	3357592..3358047 (-)	456	WP_014481057.1	hypothetical protein	-
PUN35_RS17950	-	3358096..3358551 (-)	456	WP_041516563.1	hypothetical protein	-
PUN35_RS17955	-	3359158..3360150 (-)	993	WP_014481056.1	LCP family protein	-
PUN35_RS17960	-	3360150..3360803 (-)	654	WP_014481055.1	YigZ family protein	-
PUN35_RS17965	degS	3361020..3362177 (+)	1158	WP_003227983.1	two-component sensor histidine kinase DegS	Regulator
PUN35_RS17970	degU	3362260..3362949 (+)	690	WP_014481054.1	two-component system response regulator DegU	Regulator
PUN35_RS17975	-	3363047..3363892 (+)	846	WP_014481053.1	DegV family protein	-
PUN35_RS17980	comFA	3363999..3365390 (+)	1392	WP_014481052.1	ATP-dependent helicase ComFA	Machinery gene
PUN35_RS17985	comFB	3365450..3365746 (+)	297	WP_003227989.1	late competence protein ComFB	-
PUN35_RS17990	comFC	3365710..3366432 (+)	723	WP_014481051.1	comF operon protein ComFC	Machinery gene
PUN35_RS17995	-	3366505..3366924 (+)	420	WP_014481050.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44957.76 Da
• Isoelectric Point: 6.2957

>NTDB_id=788928 PUN35_RS17965 WP_003227983.1 3361020..3362177(+) (degS) [Bacillus sp. N3378-2at]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=788928 PUN35_RS17965 WP_003227983.1 3361020..3362177(+) (degS) [Bacillus sp. N3378-2at]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAAGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATCGAGCTTGGCGATAAACTTGAAGTGCAAACCCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGGATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTACGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

3D structure

• AlphaFold DB: A0A199WDV9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	100	100	1