Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   PUN35_RS10240 Genome accession   NZ_CP117986
Coordinates   1856777..1857571 (-) Length   264 a.a.
NCBI ID   WP_014479217.1    Uniprot ID   -
Organism   Bacillus sp. N3378-2at     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1851777..1862571
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUN35_RS10205 ephM 1852620..1853480 (-) 861 WP_014479220.1 epoxide hydrolase EphM -
  PUN35_RS10210 spdL 1853467..1853799 (-) 333 WP_014479219.1 SdpC immunity protein SpdL -
  PUN35_RS10215 - 1853884..1854402 (-) 519 WP_014479218.1 SH3 domain-containing protein -
  PUN35_RS10220 - 1854547..1854816 (-) 270 WP_003243789.1 YfhJ family protein -
  PUN35_RS10225 - 1854941..1855093 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  PUN35_RS10230 - 1855125..1856318 (-) 1194 WP_003243500.1 MFS transporter -
  PUN35_RS10235 - 1856461..1856775 (-) 315 WP_003244592.1 YfhH family protein -
  PUN35_RS10240 recX 1856777..1857571 (-) 795 WP_014479217.1 recombination regulator RecX Regulator
  PUN35_RS10245 - 1857660..1858571 (+) 912 WP_014479216.1 TIGR01777 family oxidoreductase -
  PUN35_RS10250 - 1858626..1858736 (+) 111 WP_003223230.1 YfhE family protein -
  PUN35_RS10255 - 1858802..1858993 (+) 192 WP_014479215.1 YfhD family protein -
  PUN35_RS10260 - 1859032..1859616 (-) 585 WP_033881364.1 nitroreductase -
  PUN35_RS10265 - 1859704..1860585 (-) 882 WP_014479213.1 PhzF family phenazine biosynthesis isomerase -
  PUN35_RS10270 - 1860700..1861731 (-) 1032 WP_003233568.1 FecCD family ABC transporter permease -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.21 Da        Isoelectric Point: 6.6686

>NTDB_id=788907 PUN35_RS10240 WP_014479217.1 1856777..1857571(-) (recX) [Bacillus sp. N3378-2at]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=788907 PUN35_RS10240 WP_014479217.1 1856777..1857571(-) (recX) [Bacillus sp. N3378-2at]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATTAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992