Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   PUN35_RS07025 Genome accession   NZ_CP117986
Coordinates   1278565..1279029 (+) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus sp. N3378-2at     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1273565..1284029
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUN35_RS07005 fadH 1274753..1275517 (-) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -
  PUN35_RS07010 - 1275660..1276520 (+) 861 WP_003232400.1 metallophosphoesterase -
  PUN35_RS07015 - 1276577..1277071 (+) 495 WP_072174092.1 L,D-transpeptidase family protein -
  PUN35_RS07020 - 1277147..1278439 (+) 1293 WP_014479656.1 MFS transporter -
  PUN35_RS07025 kre 1278565..1279029 (+) 465 WP_003232406.1 YkyB family protein Regulator
  PUN35_RS07030 cheV 1279073..1279984 (-) 912 WP_014476655.1 chemotaxis protein CheV -
  PUN35_RS07035 - 1280188..1280349 (+) 162 WP_003245246.1 hypothetical protein -
  PUN35_RS07040 - 1280551..1281732 (+) 1182 WP_014479654.1 aminotransferase A -
  PUN35_RS07045 kinA 1281729..1283558 (-) 1830 WP_014479653.1 sporulation histidine kinase KinA -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=788891 PUN35_RS07025 WP_003232406.1 1278565..1279029(+) (kre) [Bacillus sp. N3378-2at]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=788891 PUN35_RS07025 WP_003232406.1 1278565..1279029(+) (kre) [Bacillus sp. N3378-2at]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1