Detailed information NTG0788475

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: Q6387_RS00270
• Genome accession: NZ_CP130897
• Coordinates: 53139..56279 (-)
• Length: 1046 a.a.
• NCBI ID: WP_304674313.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain NJ197542
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 48139..61279

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q6387_RS00250 (Q6387_00250)	-	49403..49792 (-)	390	WP_003687278.1	endonuclease domain-containing protein	-
Q6387_RS00260 (Q6387_00260)	-	49955..50334 (-)	380	Protein_50	VOC family protein	-
Q6387_RS00265 (Q6387_00265)	carA	50388..51521 (-)	1134	WP_003687283.1	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	-
Q6387_RS00270 (Q6387_00270)	pilC	53139..56279 (-)	3141	WP_304674313.1	PilC family type IV pilus tip adhesin	Machinery gene
Q6387_RS00275 (Q6387_00275)	apbC	59300..60379 (-)	1080	WP_304666341.1	iron-sulfur cluster carrier protein ApbC	-
Q6387_RS00285 (Q6387_00285)	-	60753..61262 (+)	510	WP_003687293.1	protein disulfide oxidoreductase	-

Sequence

Protein

• Length: 1046 a.a.
• Molecular weight: 115402.60 Da
• Isoelectric Point: 9.9293

>NTDB_id=788475 Q6387_RS00270 WP_304674313.1 53139..56279(-) (pilC) [Neisseria gonorrhoeae strain NJ197542]
MNKTLKRQVFRHTALYAAILMFSHTGGGGAMAQTRNYAIVMNERNQPEVKWDGQYQKSRLREKDGERKFIYTNQKNRWGQ
QNNFISFDNTDTLVSRQSGTAVFGTATYLPPYGKVSGFDTAELNKRGNAVNWIHTTRAGLSGYSYTGVTCRSSKCPQLVY
KTRFSFDNTGLAKNTGRLDRHPDPSRENSPIYKLKDHPWLGVSFNLGAEGTDKDGRSSNKLVSSFDENNSNSNQNLVYTT
EGHRISLGDWQREHTAMAYYLNAKLHLLDKKQIENIAPGKTVRLGTLRPRVETTGRSWLDFWATWKIEDKGNITVRLDLP
EVKAGRCINKPNPNKNTKAPSPALTAPALWFGPVQNGKVQMYSASVSTYPGSSSSRIFLQELKTQTDPGRPGRYSLAALD
AQNIKSREPNFNSRQTVIRLPGGVYKINSGKNGGRVAGINGNDGKNDTFGIYKDRLVTPEADEWSNILLPWTARYYGNDD
IFKTFNQPNSKTQNGKKQYSQKYRIRTKEDDNDKPRDLGDIVNSPIVAVGEYLATAANDGMVHIFKKNGGSDERSYNLKL
SYIPGTMPRKDIESKDSTLAKELRTFAEKGYVGDRYGVDGGFVLRRITDDQDRQKHFFMFGAMGLGGRGAYALDLTKIDS
NNLTGVSMFDVQNDKNNNKNDSNHVKLGYTVGTPQIGKTQNGKYAAFLASGYAAKDIVSSDNTTALYVYDLGNGSGSLIK
KIEAPGGKGGLSSPTLVDKDLDGTVDIAYAGDRGGNMYRFDLSDNDPNKWSVRTIFEGGKPITSAPAVSRLADKRVVIFG
TGSDLSEEDVVDTKEQYIYGIFDDDKGTVKVTVQNGTGGGLLKQTLTKESKTLFLSNNKASGGSADKGWVVKLMDGERVT
VKPTVVLRTAFVTIRKYTDTDKCGAQTAILGINTADGGALTPRSARPIVPDNQVAQYSGHQKMNGKSIPIGCMWKNGKTV
CPNGYVYDKPVNVRYLDEKKTDDFPVTADGDAGGSGTFKEGKKPARNNRCFSGKGVRTLLMNDLDSLDITGPMCGIKRLS
WREVFF

Nucleotide

• Length: 3141 bp

>NTDB_id=788475 Q6387_RS00270 WP_304674313.1 53139..56279(-) (pilC) [Neisseria gonorrhoeae strain NJ197542]
ATGAATAAAACTTTGAAAAGGCAGGTTTTCCGCCATACCGCGCTTTATGCCGCCATCTTGATGTTTTCCCATACCGGCGG
GGGGGGGGCGATGGCGCAAACCCGTAACTACGCTATTGTCATGAACGAACGAAATCAGCCGGAGGTAAAGTGGGATGGGC
AATATCAAAAATCACGATTAAGGGAAAAAGACGGGGAACGCAAATTTATCTATACGAACCAGAAAAACCGGTGGGGCCAA
CAAAACAATTTTATCTCATTCGACAATACCGATACCCTTGTTTCCCGACAAAGCGGTACTGCCGTTTTTGGCACAGCCAC
CTACCTGCCGCCCTACGGCAAGGTTTCCGGCTTTGATACCGCCGAGCTGAACAAGCGCGGCAATGCCGTCAATTGGATTC
ATACCACCCGGGCCGGGCTGTCAGGCTACTCCTACACCGGCGTCACATGCAGAAGCAGCAAATGCCCCCAACTTGTCTAT
AAAACCCGATTTTCCTTCGACAACACCGGTTTGGCAAAAAATACGGGCAGGCTGGATAGGCACCCGGACCCAAGCCGCGA
AAATTCGCCCATTTACAAATTGAAAGATCATCCATGGTTGGGCGTATCTTTCAATTTGGGCGCCGAGGGTACCGACAAAG
ATGGCAGATCATCCAACAAATTGGTATCTTCTTTTGATGAAAACAATAGTAATAGTAATCAAAACCTCGTCTATACGACA
GAAGGCCACCGTATTTCCCTTGGCGACTGGCAGCGCGAACATACCGCCATGGCCTACTATCTGAACGCCAAACTGCACCT
GCTGGATAAAAAACAGATTGAAAATATCGCGCCAGGCAAAACAGTGCGGTTGGGTACCTTGAGACCGCGCGTCGAGACGA
CAGGACGAAGCTGGCTAGATTTTTGGGCTACGTGGAAGATTGAAGATAAAGGGAACATTACAGTCCGCCTCGACCTGCCG
GAAGTCAAAGCAGGCCGCTGCATCAATAAACCGAACCCCAATAAGAATACCAAAGCCCCTTCGCCGGCACTGACCGCCCC
CGCGCTGTGGTTCGGCCCTGTGCAAAATGGTAAGGTGCAGATGTATTCCGCTTCGGTTTCTACCTACCCCGGCAGTTCGA
GCAGCCGCATCTTCCTCCAAGAGCTGAAAACTCAAACCGACCCCGGCAGGCCCGGCCGGTATTCCCTCGCCGCTTTGGAT
GCGCAGAACATCAAAAGCCGCGAGCCGAATTTCAACTCAAGGCAGACCGTCATCCGATTGCCGGGCGGCGTGTACAAGAT
CAACTCGGGCAAGAACGGCGGCCGGGTCGCGGGTATTAATGGCAATGACGGCAAAAACGACACTTTCGGCATCTACAAGG
ACAGGCTCGTCACACCTGAGGCCGACGAGTGGAGCAACATACTGCTGCCTTGGACGGCCCGGTATTACGGTAATGACGAT
ATATTTAAAACATTCAACCAACCAAACAGCAAAACACAAAACGGCAAAAAACAATACAGCCAAAAATACCGCATCCGCAC
AAAAGAAGATGACAATGACAAACCCCGCGATTTGGGCGACATCGTCAACAGCCCGATTGTCGCGGTCGGCGAGTATTTGG
CAACCGCCGCGAACGACGGGATGGTGCATATCTTCAAAAAAAACGGCGGCAGTGATGAACGCAGCTACAATCTGAAGCTC
AGCTACATCCCCGGTACGATGCCGCGCAAGGATATTGAAAGCAAAGATTCTACACTCGCCAAAGAGCTGCGCACCTTTGC
CGAAAAAGGCTATGTGGGCGACCGCTACGGCGTGGACGGCGGCTTTGTCTTGCGCCGCATTACAGATGACCAGGACAGGC
AAAAACATTTCTTTATGTTTGGTGCGATGGGCCTGGGCGGCAGAGGCGCATACGCCTTGGATTTGACCAAAATCGACAGC
AACAACCTGACCGGCGTTTCCATGTTTGATGTCCAAAACGACAAAAATAACAATAAGAATGACAGTAATCACGTGAAATT
AGGCTACACCGTCGGTACGCCGCAAATCGGCAAAACCCAAAACGGCAAATACGCCGCCTTCCTCGCTTCCGGTTATGCGG
CTAAAGATATTGTCAGCAGCGATAATACAACCGCGCTGTATGTGTATGATTTGGGAAACGGCAGTGGTAGTCTGATTAAA
AAAATCGAAGCACCCGGCGGCAAAGGCGGGCTTTCGTCCCCCACGCTGGTGGATAAAGATTTGGACGGCACAGTCGATAT
CGCCTATGCCGGCGACCGGGGCGGCAATATGTACCGCTTTGATTTGAGCGACAACGACCCGAACAAATGGTCTGTACGCA
CTATTTTCGAAGGCGGGAAGCCGATTACCTCCGCGCCCGCCGTTTCCCGACTGGCAGACAAACGCGTCGTCATCTTCGGT
ACGGGCAGCGATTTGAGTGAAGAGGATGTAGTCGATACGAAAGAACAATATATTTACGGTATCTTCGACGACGATAAGGG
GACGGTTAAGGTAACGGTACAAAACGGCACGGGAGGCGGGCTGCTCAAGCAAACGCTTACGAAGGAAAGTAAAACCTTGT
TCCTGAGCAATAATAAGGCATCCGGCGGATCGGCCGATAAAGGCTGGGTAGTGAAATTGATGGACGGAGAACGCGTTACC
GTCAAACCGACCGTGGTATTGCGTACCGCCTTCGTGACCATCCGGAAATATACGGATACGGACAAATGTGGCGCGCAAAC
CGCCATTTTGGGCATCAATACCGCCGACGGCGGCGCATTGACTCCGAGAAGCGCGCGCCCGATTGTGCCGGATAACCAGG
TTGCGCAATATTCCGGCCATCAGAAAATGAACGGCAAGTCCATCCCCATAGGCTGCATGTGGAAAAACGGCAAAACCGTC
TGCCCGAACGGATATGTTTACGACAAACCGGTTAATGTGCGTTACCTGGACGAAAAGAAAACAGACGATTTCCCCGTCAC
GGCAGACGGTGATGCAGGCGGCAGCGGAACATTCAAAGAGGGTAAAAAACCCGCCCGCAATAACCGGTGCTTCTCCGGAA
AAGGTGTGCGCACCCTGCTGATGAACGATTTGGACAGCTTGGATATTACCGGCCCGATGTGCGGTATCAAACGCTTAAGC
TGGCGCGAAGTCTTCTTCTGA

Domains

Predicted by InterProScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (518-859)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	73.649	100	0.743