Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   PT966_RS05690 Genome accession   NZ_CP117945
Coordinates   1099848..1100039 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain ZY1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1094848..1105039
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PT966_RS05660 (PT966_05660) argF 1095701..1096672 (+) 972 WP_044053094.1 ornithine carbamoyltransferase -
  PT966_RS05665 (PT966_05665) - 1096748..1096927 (+) 180 WP_044053095.1 YjzC family protein -
  PT966_RS05670 (PT966_05670) - 1096963..1097148 (-) 186 WP_003155069.1 YjzD family protein -
  PT966_RS05675 (PT966_05675) - 1097409..1098143 (+) 735 WP_014304780.1 hypothetical protein -
  PT966_RS05680 (PT966_05680) - 1098226..1098792 (+) 567 WP_003155065.1 hypothetical protein -
  PT966_RS05685 (PT966_05685) med 1098882..1099835 (+) 954 WP_044053096.1 BMP family ABC transporter substrate-binding protein Regulator
  PT966_RS05690 (PT966_05690) comZ 1099848..1100039 (+) 192 WP_003155061.1 ComZ family protein Regulator
  PT966_RS05695 (PT966_05695) - 1100069..1100287 (-) 219 WP_044053097.1 hypothetical protein -
  PT966_RS05700 (PT966_05700) - 1100455..1101393 (+) 939 WP_003155057.1 beta-ketoacyl-ACP synthase III -
  PT966_RS05705 (PT966_05705) fabF 1101416..1102654 (+) 1239 WP_003155056.1 beta-ketoacyl-ACP synthase II -
  PT966_RS05710 (PT966_05710) - 1102738..1103523 (+) 786 WP_012117278.1 DUF2268 domain-containing protein -
  PT966_RS05715 (PT966_05715) - 1103697..1104683 (+) 987 WP_003155054.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=788405 PT966_RS05690 WP_003155061.1 1099848..1100039(+) (comZ) [Bacillus velezensis strain ZY1]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=788405 PT966_RS05690 WP_003155061.1 1099848..1100039(+) (comZ) [Bacillus velezensis strain ZY1]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterProScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794