Detailed information NTG0788192

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: Q6385_RS00270
• Genome accession: NZ_CP130893
• Coordinates: 53139..56279 (-)
• Length: 1046 a.a.
• NCBI ID: WP_304666187.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain NJ1914646
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 48139..61279

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q6385_RS00250 (Q6385_00250)	-	49403..49792 (-)	390	WP_304666186.1	endonuclease domain-containing protein	-
Q6385_RS00260 (Q6385_00260)	-	49955..50334 (-)	380	Protein_50	VOC family protein	-
Q6385_RS00265 (Q6385_00265)	carA	50388..51521 (-)	1134	WP_003687283.1	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	-
Q6385_RS00270 (Q6385_00270)	pilC	53139..56279 (-)	3141	WP_304666187.1	PilC family type IV pilus tip adhesin	Machinery gene
Q6385_RS00275 (Q6385_00275)	apbC	58016..59095 (-)	1080	WP_050157562.1	iron-sulfur cluster carrier protein ApbC	-
Q6385_RS00285 (Q6385_00285)	-	59469..59978 (+)	510	WP_003687293.1	protein disulfide oxidoreductase	-
Q6385_RS00290 (Q6385_00290)	nadR	60319..60759 (+)	441	WP_003687296.1	MarR family adhesin repressor NadR	-

Sequence

Protein

• Length: 1046 a.a.
• Molecular weight: 115212.59 Da
• Isoelectric Point: 9.8867

>NTDB_id=788192 Q6385_RS00270 WP_304666187.1 53139..56279(-) (pilC) [Neisseria gonorrhoeae strain NJ1914646]
MNKTLKRRVFRHTALYAAILMFSHTGGGGAMAQTRKYAIVMNERNQPEVKWDGQYQKSQLREKDGERKFIYTNQKYWSGQ
QNNFISFDNTDTLVSRQSGTAVFGTATYLPPYGKVSGFDTAELNKRGNAVNWIRTTRAGLAGYAYTGIRCGHARDCPKLT
YKTQFSFDNPDLAKTGDRLDRHTEPSRDNSPIYKLKDYPWLGVSFNLGAEGTAKDGRSSSRLISSFNEKNSNNNLVYTTE
GRDISLGNWQSESTAVAYYLNAKLHLLDKKEIKDITGKTVRLGVLKPSIDVKTQNTGFAGLLNFWSKWDIKDNGQIPVKL
GLPEVKAGRCTNKPNPNPKSKAPSPALTAPALWFGPVQNGKVQMYSASVSTYPGSSSSRIFLQELKTQTDPGRPGRYSLA
ALNAQDIKSREPNFNSRQTVIRLPGGVYRIAPTRDRIVGLNGNDGKNDTFGIYKERLVTPDADEWAKVLLPWTVRYYGND
DIFKTFNQPNSKTQNGKKQYSQKYRIRTKEDDNDKPRDLGDIVNSPITAVGGYLATSANDGMVHLFKRNGTDQRGYELKL
SYIPGTMERKDIEGNDSDLAKELRAFAEKGYVGDRYGVDGGFVLRRITDDQDRQKHFFMFGAMGLGGRGAYALDLTKIDS
NNLTGVSMFDVQNDKNNNNNDSNRVKLGYTVGTPQIGKTQNGKYAAFLASGYAAKDIVSSDNTTALYVYDLGNGGGSLIK
KIEAPGGKGGLSSPTLVDKDLDGTVDIAYAGDRGGNMYRFDLSDNDPNKWSVRTIFEGGKPITSAPAVSRLADKRVVIFG
TGSDLSEEDVVDTKEQYIYGIFDDDKGTVKVTVQNGTGGGLLKQTLTKESKTLFLSNNKASGGSADKGWVVKLMDGERVT
VKPTVVLRTAFVTIRKYTDTDKCGAQTAILGINTADGGALTPRSARPIVPDNQVAQYSGHQKMNGKSIPIGCMWKNGKTV
CPNGYVYDKPVNVRYLDEKKTDDFPVTADGDAGGSGTFKEGKKPARNNRCFSGKGVRTLLMNDLDSLDITGPMCGIKRLS
WREVFF

Nucleotide

• Length: 3141 bp

>NTDB_id=788192 Q6385_RS00270 WP_304666187.1 53139..56279(-) (pilC) [Neisseria gonorrhoeae strain NJ1914646]
ATGAATAAAACTTTAAAAAGGCGGGTTTTCCGCCATACCGCGCTTTATGCCGCCATCTTGATGTTTTCCCATACCGGCGG
GGGGGGGGCGATGGCGCAAACCCGTAAATACGCTATTGTCATGAACGAACGAAATCAGCCGGAGGTAAAGTGGGATGGGC
AATATCAAAAATCACAATTAAGGGAAAAAGACGGGGAACGCAAATTTATCTATACGAACCAGAAATACTGGTCGGGTCAA
CAAAACAATTTTATCTCATTCGACAATACCGATACCCTTGTTTCCCGACAAAGCGGTACTGCCGTTTTTGGCACAGCCAC
CTACCTGCCGCCCTACGGCAAGGTTTCCGGCTTTGATACCGCCGAGCTGAACAAGCGCGGCAATGCCGTCAATTGGATTC
GTACCACCCGGGCCGGGCTGGCAGGCTACGCCTACACCGGTATCCGTTGCGGACATGCCCGAGACTGTCCCAAACTTACC
TATAAAACCCAATTTTCCTTCGATAATCCCGACTTGGCAAAAACAGGAGACAGGCTGGATAGGCACACAGAGCCAAGCCG
CGACAATTCGCCCATTTACAAATTGAAGGATTATCCATGGTTGGGCGTGTCTTTCAATTTGGGCGCCGAGGGTACCGCCA
AAGATGGCAGATCATCCAGCAGATTGATATCTTCTTTTAATGAAAAGAATAGTAATAACAACCTCGTCTATACCACGGAA
GGCCGCGATATTTCCTTGGGCAACTGGCAGAGCGAAAGTACCGCCGTGGCCTATTATCTGAACGCCAAGCTGCACCTGCT
GGACAAAAAAGAGATTAAAGATATCACCGGCAAAACAGTGCGGTTGGGTGTCTTGAAGCCGAGCATCGATGTGAAGACAC
AAAATACGGGGTTTGCCGGCTTGCTAAATTTTTGGTCTAAGTGGGACATTAAAGATAACGGGCAGATTCCGGTCAAGCTC
GGCCTGCCGGAAGTCAAAGCCGGGCGCTGCACCAACAAACCGAACCCCAATCCCAAATCCAAAGCCCCTTCGCCGGCACT
GACCGCCCCCGCGCTGTGGTTCGGCCCTGTGCAAAATGGCAAGGTGCAGATGTATTCCGCTTCGGTTTCTACCTACCCCG
GCAGTTCGAGCAGCCGCATCTTCCTCCAAGAGCTGAAAACTCAAACCGACCCCGGCAGGCCCGGCCGGTATTCCCTCGCC
GCTTTGAATGCGCAGGATATCAAATCCCGCGAGCCGAATTTCAACTCAAGGCAGACCGTCATCCGATTGCCGGGCGGCGT
GTACCGGATCGCCCCGACTCGCGACAGGATCGTGGGTTTGAATGGCAATGACGGCAAAAACGACACTTTCGGCATCTACA
AGGAAAGGTTAGTCACACCTGATGCCGACGAGTGGGCAAAAGTGCTGCTGCCTTGGACGGTCCGGTATTACGGTAATGAC
GATATATTTAAAACATTCAACCAACCAAACAGCAAAACACAAAACGGCAAAAAACAATACAGCCAAAAATACCGCATCCG
CACAAAAGAAGATGACAATGACAAACCCCGCGATTTGGGCGACATCGTCAACAGCCCGATAACGGCGGTCGGCGGGTATC
TGGCAACTTCTGCCAACGACGGGATGGTGCACCTGTTTAAAAGAAACGGCACAGACCAACGAGGCTACGAACTGAAGCTC
AGCTACATCCCCGGTACGATGGAGCGTAAGGATATTGAAGGCAATGACTCCGACCTCGCCAAAGAGCTGCGCGCCTTTGC
CGAAAAAGGCTATGTGGGCGACCGCTACGGCGTGGACGGCGGCTTTGTCTTGCGCCGCATTACAGATGACCAGGACAGGC
AAAAACATTTCTTTATGTTTGGTGCGATGGGCCTTGGCGGCAGAGGCGCATACGCCTTGGATTTGACCAAAATCGACAGC
AACAACCTGACCGGCGTTTCCATGTTTGATGTCCAAAACGACAAAAATAACAATAACAATGACAGTAATCGCGTGAAATT
AGGCTACACCGTCGGTACGCCGCAAATCGGCAAAACCCAAAACGGCAAATACGCCGCCTTCCTCGCCTCCGGTTATGCGG
CTAAAGATATTGTCAGCAGCGATAATACAACCGCGCTGTATGTGTATGATTTGGGAAACGGCGGTGGTAGTCTGATTAAA
AAAATCGAAGCACCCGGCGGCAAAGGCGGGCTTTCGTCCCCCACGCTGGTGGATAAAGATTTGGACGGCACAGTCGATAT
CGCCTATGCCGGCGACCGGGGCGGCAATATGTACCGCTTTGATTTGAGCGACAACGACCCGAACAAATGGTCTGTACGCA
CTATTTTCGAAGGCGGGAAGCCGATTACCTCCGCGCCCGCCGTTTCCCGACTGGCAGACAAACGCGTCGTCATCTTCGGT
ACGGGCAGCGATTTGAGTGAAGAGGATGTAGTCGATACGAAAGAACAATATATTTACGGTATCTTCGACGACGATAAGGG
GACGGTTAAGGTAACGGTACAAAACGGCACGGGAGGCGGGCTGCTCAAGCAAACGCTTACGAAGGAAAGTAAAACCTTGT
TCCTGAGCAATAATAAGGCATCCGGCGGATCGGCCGATAAAGGCTGGGTAGTGAAATTGATGGACGGAGAACGCGTTACC
GTCAAACCGACCGTGGTATTGCGTACCGCCTTCGTGACCATCCGGAAATATACGGATACGGACAAATGTGGCGCGCAAAC
CGCCATTTTGGGCATCAATACCGCCGACGGCGGCGCATTGACTCCGAGAAGCGCGCGCCCGATTGTGCCGGATAACCAGG
TTGCGCAATATTCCGGCCATCAGAAAATGAACGGCAAGTCCATCCCCATAGGCTGCATGTGGAAAAACGGCAAAACCGTC
TGCCCGAACGGATATGTTTACGACAAACCGGTTAATGTGCGTTACCTGGACGAAAAGAAAACAGACGATTTCCCCGTCAC
GGCAGACGGTGATGCAGGCGGCAGCGGAACATTCAAAGAGGGTAAAAAACCCGCCCGCAATAACCGGTGCTTCTCCGGAA
AAGGTGTGCGCACCCTGCTGATGAACGATTTGGACAGCTTGGATATTACCGGCCCGATGTGCGGTATCAAACGCTTAAGC
TGGCGCGAAGTCTTCTTCTGA

Domains

Predicted by InterProScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (519-859)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	70.17	100	0.708