Detailed information NTG0787939

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: Q6378_RS04745
• Genome accession: NZ_CP130889
• Coordinates: 912915..916028 (+)
• Length: 1037 a.a.
• NCBI ID: WP_304674284.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain NJ209649
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 907915..921028

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q6378_RS04725 (Q6378_04725)	nadR	908486..908926 (-)	441	WP_003687296.1	MarR family adhesin repressor NadR	-
Q6378_RS04730 (Q6378_04730)	-	909267..909776 (-)	510	WP_003687293.1	protein disulfide oxidoreductase	-
Q6378_RS04740 (Q6378_04740)	apbC	910150..911229 (+)	1080	WP_003699443.1	iron-sulfur cluster carrier protein ApbC	-
Q6378_RS04745 (Q6378_04745)	pilC	912915..916028 (+)	3114	WP_304674284.1	PilC family type IV pilus tip adhesin	Machinery gene
Q6378_RS04750 (Q6378_04750)	carA	917646..918779 (+)	1134	WP_003687283.1	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	-
Q6378_RS04755 (Q6378_04755)	-	918833..919212 (+)	380	Protein_928	VOC family protein	-
Q6378_RS04765 (Q6378_04765)	-	919375..919764 (+)	390	WP_003687278.1	endonuclease domain-containing protein	-

Sequence

Protein

• Length: 1037 a.a.
• Molecular weight: 114311.79 Da
• Isoelectric Point: 9.9537

>NTDB_id=787939 Q6378_RS04745 WP_304674284.1 912915..916028(+) (pilC) [Neisseria gonorrhoeae strain NJ209649]
MNKTLKRQVFRHTALYAAILMFSHTGGGGGQAQARDYAIIMNERNQPDVRWDGQYQKSQLREKDRERKFIYNKDRQGGGS
VFFDNTDELVSQQSGTAVFGTATYLPPYGKVSGFDADGLKKRGNAVNWIRTTRPGLAGYVYTGVICRDAKQCPELIYETK
FSFDGIGLAKGGNRKLDRHPDPSRDNSPIYKLKDYPWLGVSFNLGGENTAKDGRSSSRWISSFSEDNNNQTIVFTTRGHP
ISLGDWQRESTAMAYYLNAKLHLLDKKKIENIAPGKTVDLGTLRPRVEAKVRRGWSLLNFWSKWDIKDNGQIPVKLGLPE
VKAGRCTNKPNPNPKSKAPSPALTAPALWFGPVQNGKVQMYSASVSTYPGSSSSRIFLQELKTQTDPGRPGRYSLAALNA
QDIKSREPNFNSRQTVIRLPGGVYRIAPTRDRIVGLNGNDGKNDTFGIYKERLVTPDADEWKKVLLPWTVRYYGNDDIFK
TFNQPNSKTQNGKKQYSQKYRIRENGNRDLGDIVNSPITAVGGYLATSANDGMVHIFKKTGTDQRGYELKLSYIPGTMER
KDIENQDSTLAKELRTFAEKGYVGDRYGVDGGFVLRRITDDQDRQKHFFMFGAMGLGGRGAYALDLTKIDSNNLTGVSMF
DVQNDKNNNNNDSNRVKLGYTVGTPQIGKTQNGKYAAFLASGYAAKDIVSSDNTTALYVYDLGNGGGSLIKKIEAPGGKG
GLSSPTLVDKDLDGTVDIAYAGDRGGNMYRFDLSDNDPNKWSVRTIFEGGKPITSAPAVSRLADKRVVIFGTGSDLSEED
VVDTKEQYIYGIFDDDKGTVKVTVQNGTGGGLLKQTLTKESKTLFLSNNKASGGSADKGWVVKLMDGERVTVKPTVVLRT
AFVTIRKYTDTDKCGAQTAILGINTADGGALTPRSARPIVPDNQVAQYSGHQKMNGKSIPIGCMWKNGKTVCPNGYVYDK
PVNVRYLDEKKTDDFPVTADGDAGGSGTFKEGKKPARNNRCFSGKGVRTLLMNDLDSLDITGPMCGIKRLSWREVFF

Nucleotide

• Length: 3114 bp

>NTDB_id=787939 Q6378_RS04745 WP_304674284.1 912915..916028(+) (pilC) [Neisseria gonorrhoeae strain NJ209649]
ATGAATAAAACTTTGAAAAGGCAGGTTTTCCGCCATACCGCGCTTTATGCCGCCATCTTGATGTTTTCCCATACCGGCGG
GGGGGGGGGGCAGGCGCAAGCCCGTGACTACGCTATTATCATGAACGAACGAAATCAGCCGGATGTAAGGTGGGATGGGC
AATATCAAAAATCACAATTAAGGGAAAAAGACAGGGAACGCAAATTTATCTATAATAAAGACAGACAGGGTGGAGGCTCT
GTCTTTTTCGACAATACCGATGAGCTTGTTTCTCAACAAAGCGGTACTGCCGTTTTTGGCACAGCCACCTACCTGCCGCC
CTACGGCAAGGTTTCCGGTTTTGATGCCGACGGGCTGAAAAAGCGCGGCAATGCCGTCAATTGGATTCGTACCACCCGGC
CCGGGCTGGCAGGCTACGTCTACACCGGCGTCATATGCAGAGACGCAAAGCAATGCCCCGAACTTATCTATGAGACCAAA
TTTTCCTTCGACGGCATCGGTTTGGCAAAAGGGGGAAACCGAAAGCTGGATAGGCACCCGGACCCAAGCCGCGACAATTC
GCCCATTTACAAATTGAAGGATTATCCATGGTTGGGCGTATCTTTCAATTTGGGCGGCGAGAATACCGCCAAAGATGGCA
GATCATCCAGCAGATGGATATCTTCTTTTAGTGAAGACAATAATAATCAAACCATCGTCTTTACGACACGAGGCCACCCT
ATTTCCCTTGGCGACTGGCAGCGCGAAAGTACCGCCATGGCCTATTATCTGAACGCCAAACTGCACCTGCTGGATAAAAA
AAAGATTGAAAATATCGCGCCAGGCAAAACAGTGGATTTGGGCACCTTGAGACCGCGCGTCGAGGCAAAGGTAAGGCGGG
GGTGGAGTCTGCTAAATTTTTGGTCTAAGTGGGACATTAAAGATAACGGGCAGATTCCGGTCAAGCTCGGCCTGCCGGAA
GTCAAAGCCGGGCGCTGCACCAACAAACCGAACCCCAATCCCAAATCCAAAGCCCCTTCGCCGGCACTGACCGCCCCCGC
GCTGTGGTTCGGCCCTGTGCAAAATGGCAAGGTGCAGATGTATTCCGCTTCGGTTTCTACCTACCCCGGCAGTTCGAGCA
GCCGCATCTTCCTCCAAGAGCTGAAAACTCAAACCGACCCCGGCAGGCCCGGCCGGTATTCCCTCGCCGCTTTGAATGCG
CAGGATATCAAATCCCGCGAGCCGAATTTCAACTCAAGGCAGACCGTCATCCGATTGCCGGGCGGCGTGTACCGGATCGC
CCCGACTCGCGACAGGATCGTGGGTTTGAATGGCAATGACGGCAAAAACGACACTTTCGGCATCTACAAGGAAAGGTTAG
TCACACCTGATGCCGACGAGTGGAAAAAAGTGCTGCTGCCTTGGACGGTCCGGTATTACGGTAATGACGATATATTTAAA
ACATTCAACCAACCAAACAGCAAAACACAAAACGGCAAAAAACAATACAGCCAAAAATACCGCATCCGCGAAAACGGCAA
TCGCGATTTGGGCGACATCGTCAACAGCCCGATAACGGCGGTCGGCGGGTATCTGGCAACTTCTGCCAACGACGGGATGG
TGCATATCTTCAAAAAAACCGGCACAGACCAACGAGGCTACGAACTGAAGCTCAGCTACATCCCCGGTACGATGGAGCGT
AAGGATATTGAAAACCAAGACTCCACCCTCGCCAAAGAGCTGCGCACCTTTGCCGAAAAAGGCTATGTGGGCGACCGCTA
CGGCGTGGACGGCGGCTTTGTCTTGCGCCGCATTACAGATGACCAGGACAGGCAAAAACATTTCTTTATGTTTGGTGCGA
TGGGCCTTGGCGGCAGAGGCGCATACGCCTTGGATTTGACCAAAATCGACAGCAACAACCTGACCGGCGTTTCCATGTTT
GATGTCCAAAACGACAAAAATAACAATAACAATGACAGTAATCGCGTGAAATTAGGCTACACCGTCGGTACGCCGCAAAT
CGGCAAAACCCAAAACGGCAAATACGCCGCCTTCCTCGCCTCCGGTTATGCGGCTAAAGATATTGTCAGCAGCGATAATA
CAACCGCGCTGTATGTGTATGATTTGGGAAACGGCGGTGGTAGTCTGATTAAAAAAATCGAAGCACCCGGCGGCAAAGGC
GGGCTTTCGTCCCCCACGCTGGTGGATAAAGATTTGGACGGCACAGTCGATATCGCCTATGCCGGCGACCGGGGCGGCAA
TATGTACCGCTTTGATTTGAGCGACAACGACCCGAACAAATGGTCTGTACGCACTATTTTCGAAGGCGGGAAGCCGATTA
CCTCCGCGCCCGCCGTTTCCCGACTGGCAGACAAACGCGTCGTCATCTTCGGTACGGGCAGCGATTTGAGTGAAGAGGAT
GTAGTCGATACGAAAGAACAATATATTTACGGTATCTTCGACGACGATAAGGGGACGGTTAAGGTAACGGTACAAAACGG
CACGGGAGGCGGGCTGCTCAAGCAAACGCTTACGAAGGAAAGTAAAACCTTGTTCCTGAGCAATAATAAGGCATCCGGCG
GATCGGCCGATAAAGGCTGGGTAGTGAAATTGATGGACGGAGAACGCGTTACCGTCAAACCGACCGTGGTATTGCGTACC
GCCTTCGTGACCATCCGGAAATATACGGATACGGACAAATGTGGCGCGCAAACCGCCATTTTGGGCATCAATACCGCCGA
CGGCGGCGCATTGACTCCGAGAAGCGCGCGCCCGATTGTGCCGGATAACCAGGTTGCGCAATATTCCGGCCATCAGAAAA
TGAACGGCAAGTCCATCCCCATAGGCTGCATGTGGAAAAACGGCAAAACCGTCTGCCCGAACGGATATGTTTACGACAAA
CCGGTTAATGTGCGTTACCTGGACGAAAAGAAAACAGACGATTTCCCCGTCACGGCAGACGGTGATGCAGGCGGCAGCGG
AACATTCAAAGAGGGTAAAAAACCCGCCCGCAATAACCGGTGCTTCTCCGGAAAAGGTGTGCGCACCCTGCTGATGAACG
ATTTGGACAGCTTGGATATTACCGGCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTCTTCTGA

Domains

Predicted by InterProScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (510-850)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	75	100	0.758