Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   QML87_RS02580 Genome accession   NZ_AP025936
Coordinates   513208..513474 (+) Length   88 a.a.
NCBI ID   WP_001808618.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain PZ900700617     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 508208..518474
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QML87_RS02560 (PC0607_04990) - 508423..508932 (+) 510 WP_000619950.1 N-acetyltransferase -
  QML87_RS02565 (PC0607_05000) pheT 509009..511411 (+) 2403 WP_000961560.1 phenylalanine--tRNA ligase subunit beta -
  QML87_RS02570 (PC0607_05010) - 511479..512480 (-) 1002 WP_054363430.1 endonuclease/exonuclease/phosphatase family protein -
  QML87_RS02575 (PC0607_05020) - 512636..513124 (+) 489 Protein_508 helix-turn-helix domain-containing protein -
  QML87_RS02580 (PC0607_05030) HI0659 513208..513474 (+) 267 WP_001808618.1 helix-turn-helix transcriptional regulator Machinery gene
  QML87_RS02585 (PC0607_05040) metE 513735..515984 (+) 2250 WP_000108274.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  QML87_RS02590 (PC0607_05050) metF 516048..516914 (+) 867 WP_000089976.1 methylenetetrahydrofolate reductase [NAD(P)H] -
  QML87_RS10365 - 517096..517368 (-) 273 WP_000857732.1 hypothetical protein -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9622.15 Da        Isoelectric Point: 4.4893

>NTDB_id=78778 QML87_RS02580 WP_001808618.1 513208..513474(+) (HI0659) [Streptococcus pneumoniae strain PZ900700617]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGISQPVIARMETGKTSPQLDTVLKVLASLGKTLAI
VPLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=78778 QML87_RS02580 WP_001808618.1 513208..513474(+) (HI0659) [Streptococcus pneumoniae strain PZ900700617]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAATAAGCCAGCCTGTCATAGCTA
GGATGGAGACAGGAAAGACTAGTCCTCAGTTGGATACAGTCTTAAAAGTCCTAGCCAGTTTAGGAAAGACACTAGCAATC
GTCCCACTTGAACAGGGAAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(29-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

61.039

87.5

0.534

Multiple sequence alignment