Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PT012_RS04390 Genome accession   NZ_CP117820
Coordinates   958108..958524 (-) Length   138 a.a.
NCBI ID   WP_004085459.1    Uniprot ID   A0A060H0R7
Organism   Xylella fastidiosa subsp. multiplex strain ICMP 8740     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 953108..963524
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PT012_RS04380 (PT012_04380) - 955479..957521 (-) 2043 WP_027700702.1 methyl-accepting chemotaxis protein -
  PT012_RS04385 (PT012_04385) - 957561..958091 (-) 531 WP_004085458.1 chemotaxis protein CheW -
  PT012_RS04390 (PT012_04390) pilG 958108..958524 (-) 417 WP_004085459.1 response regulator Regulator
  PT012_RS04395 (PT012_04395) gshB 958780..959724 (+) 945 WP_027700701.1 glutathione synthase -
  PT012_RS04400 (PT012_04400) - 959726..960601 (+) 876 WP_004085461.1 energy transducer TonB -
  PT012_RS04405 (PT012_04405) - 960910..961719 (+) 810 WP_038231219.1 DUF6216 family protein -

Sequence

Protein


Download         Length: 138 a.a.        Molecular weight: 15325.02 Da        Isoelectric Point: 9.7976

>NTDB_id=787769 PT012_RS04390 WP_004085459.1 958108..958524(-) (pilG) [Xylella fastidiosa subsp. multiplex strain ICMP 8740]
MIKSVASGKELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTAIDGFEALAKIADQKSQIIFVDIMMPRLDGYQTCALIK
NNNLFKSTPVIMLSSKDGLFDKARGRVVGSEQYLTKPFTREELLSAIRTYVNPLKLAV

Nucleotide


Download         Length: 417 bp        

>NTDB_id=787769 PT012_RS04390 WP_004085459.1 958108..958524(-) (pilG) [Xylella fastidiosa subsp. multiplex strain ICMP 8740]
ATGATTAAAAGTGTTGCTAGCGGCAAGGAACTCGCAGGTCTTAGGGTGATGGTCATCGATGACTCAAAAACCATAAGACG
TACCGCTGAAACGCTTCTTAAGCGTGAAGGGTGTGAGGTGGTTACCGCTATTGATGGCTTTGAAGCCTTAGCGAAAATTG
CTGATCAGAAGTCGCAGATTATTTTTGTCGATATTATGATGCCGCGCTTGGATGGTTATCAAACTTGCGCGTTGATAAAA
AACAATAACTTGTTTAAGTCGACTCCAGTGATCATGCTTTCATCTAAAGATGGCTTATTCGATAAGGCGCGCGGTCGTGT
GGTTGGTTCCGAACAATATCTGACCAAACCTTTTACACGCGAGGAGTTGTTAAGTGCCATCCGTACATATGTTAATCCTT
TAAAATTAGCTGTTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A060H0R7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.77

88.406

0.652