Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilZ   Type   Machinery gene
Locus tag   PT257_RS06335 Genome accession   NZ_CP117818
Coordinates   1422167..1422508 (+) Length   113 a.a.
NCBI ID   WP_025519545.1    Uniprot ID   A0A128V7G5
Organism   Legionella pneumophila strain D5916     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1417167..1427508
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PT257_RS06310 (PT257_06310) acpP 1417996..1418244 (+) 249 WP_003631752.1 acyl carrier protein -
  PT257_RS06315 (PT257_06315) fabF 1418264..1419502 (+) 1239 WP_011213689.1 beta-ketoacyl-ACP synthase II -
  PT257_RS06320 (PT257_06320) mltG 1419503..1420501 (+) 999 WP_027220671.1 endolytic transglycosylase MltG -
  PT257_RS06325 (PT257_06325) tmk 1420501..1421139 (+) 639 WP_027220670.1 dTMP kinase -
  PT257_RS06330 (PT257_06330) - 1421136..1422041 (+) 906 WP_011213692.1 DNA polymerase III subunit delta' -
  PT257_RS06335 (PT257_06335) pilZ 1422167..1422508 (+) 342 WP_025519545.1 PilZ domain-containing protein Machinery gene
  PT257_RS06340 (PT257_06340) - 1422568..1423356 (+) 789 WP_011213694.1 TatD family hydrolase -
  PT257_RS06345 (PT257_06345) - 1423468..1424568 (+) 1101 WP_011213695.1 anhydro-N-acetylmuramic acid kinase -
  PT257_RS06350 (PT257_06350) - 1424624..1425916 (+) 1293 WP_011213696.1 MFS transporter -
  PT257_RS06355 (PT257_06355) - 1425989..1426132 (+) 144 WP_169042656.1 hypothetical protein -

Sequence

Protein


Download         Length: 113 a.a.        Molecular weight: 12521.54 Da        Isoelectric Point: 8.2421

>NTDB_id=787728 PT257_RS06335 WP_025519545.1 1422167..1422508(+) (pilZ) [Legionella pneumophila strain D5916]
MTEKPQLINCSFPNEASLYMAYMPFVKGGGLFIRTQHVYSLGQSLELSVKLLNENEPYLVTGKIVWITPKGAQGNKPPGV
GIQFTGENSRYLCNKIETYLAGMLKSCQVTDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=787728 PT257_RS06335 WP_025519545.1 1422167..1422508(+) (pilZ) [Legionella pneumophila strain D5916]
ATGACCGAAAAACCACAGCTTATAAACTGCTCATTTCCCAATGAAGCATCTTTGTACATGGCTTACATGCCTTTTGTGAA
GGGTGGCGGTCTTTTTATAAGAACTCAACACGTTTATTCTCTAGGGCAGTCGCTTGAATTATCTGTTAAATTGCTTAATG
AAAATGAACCATATTTGGTCACTGGTAAAATAGTCTGGATTACTCCTAAAGGTGCACAAGGTAATAAGCCGCCGGGAGTT
GGTATTCAATTTACCGGTGAAAACAGCCGTTATCTATGTAACAAGATAGAAACTTATTTGGCAGGAATGCTAAAATCATG
TCAGGTTACAGATACTATCTAG

Domains

Predicted by InterproScan.

PilZ domain (PilZ)

(8-101)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A128V7G5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

100

100

1
  pilZ Legionella pneumophila strain ERS1305867

100

100

1