Detailed information NTG0787153

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: PSR14_RS27905
• Genome accession: NZ_CP117702
• Coordinates: 5229464..5230813 (-)
• Length: 449 a.a.
• NCBI ID: WP_000879439.1
• Uniprot ID: -
• Organism: Bacillus sp. A01H
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5224464..5235813

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PSR14_RS27885 (PSR14_27860)	secA	5224789..5227296 (-)	2508	WP_000579381.1	preprotein translocase subunit SecA	-
PSR14_RS27890 (PSR14_27865)	hpf	5227572..5228114 (-)	543	WP_000671190.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
PSR14_RS27895 (PSR14_27870)	cspC	5228436..5228633 (-)	198	WP_001162041.1	cold shock protein CspC	-
PSR14_RS27900 (PSR14_27875)	-	5228760..5229464 (-)	705	WP_074541125.1	ComF family protein	-
PSR14_RS27905 (PSR14_27880)	comFA	5229464..5230813 (-)	1350	WP_000879439.1	ATP-dependent helicase ComFA	Machinery gene
PSR14_RS27910 (PSR14_27885)	-	5230940..5232391 (-)	1452	WP_113732579.1	NlpC/P60 family protein	-
PSR14_RS27915 (PSR14_27890)	-	5232539..5232853 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
PSR14_RS27920 (PSR14_27895)	-	5233027..5233869 (-)	843	WP_000844764.1	DegV family protein	-
PSR14_RS27925 (PSR14_27900)	-	5234109..5234744 (+)	636	WP_098487178.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51069.57 Da
• Isoelectric Point: 9.7406

>NTDB_id=787153 PSR14_RS27905 WP_000879439.1 5229464..5230813(-) (comFA) [Bacillus sp. A01H]
MLAGKQLLLEELSSDLRRELSDLKKKGEVVCVQGITKNTSKYICQRCGNIEQRLFASFLCKRCGKACAYCRKCITMGRVS
ECTVLVRGIHERNGDRELNPLQWNGALSIGQELAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGIEEALQKGERVCIAT
PRTDVVLELAPRLQEVFPSITVAALYGGSVDHKKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVRQAM
KEKAARIYLTATPDEKWKRNFRRGKQKGIIVSGRYHRHPLPVPLFSWCGNWKKSLHHKKIPRVLLQWLKMNLNKKYPIFL
FVPHVRYIEEISQLLKGLDNRIDGVHAEDSMRKEKVASFRKGDIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEEPYGEVMYFHYGKTEAMVRAKKHIQSMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=787153 PSR14_RS27905 WP_000879439.1 5229464..5230813(-) (comFA) [Bacillus sp. A01H]
ATGCTTGCTGGAAAACAGTTGCTATTAGAAGAACTCTCTTCAGATTTACGGAGAGAATTAAGTGATTTGAAAAAGAAGGG
AGAGGTTGTATGTGTACAAGGTATAACAAAGAATACTTCTAAATATATATGTCAGCGCTGCGGAAATATAGAGCAGCGGC
TATTTGCATCATTTTTATGTAAAAGGTGCGGTAAAGCATGTGCGTATTGCCGGAAGTGTATCACGATGGGGAGAGTTAGC
GAATGTACTGTACTTGTTCGCGGGATTCATGAAAGAAACGGAGACAGGGAGCTAAATCCATTACAGTGGAATGGGGCTTT
ATCGATTGGTCAGGAGTTGGCGGCGCAAGGAGTTATAGAAGCGATTAAGCAGAAAGAATCTTTTTTTATTTGGGCTGTGT
GCGGGGCTGGAAAAACAGAAATGTTATTTTACGGTATAGAAGAGGCGCTCCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCAAGGACTGACGTTGTACTGGAATTAGCGCCGAGATTACAAGAAGTGTTTCCAAGTATAACTGTAGCTGCTTTATACGG
AGGGAGTGTAGATCATAAAAAAGATGCAGCGTTAGTCGTTGCAACGACTCACCAACTGTTACGTTACTATAGAGCGTTTC
ATGTGATGATTGTAGATGAGATTGATGCCTTCCCGTATCATGCAGATCAAATGTTACAGTATGCAGTTAGGCAAGCAATG
AAAGAGAAAGCAGCGCGTATTTATTTAACTGCAACCCCTGATGAAAAGTGGAAGCGTAATTTCAGAAGAGGGAAACAAAA
AGGTATCATTGTTTCAGGAAGATACCATCGTCACCCGTTACCAGTTCCTCTATTTAGTTGGTGCGGAAATTGGAAGAAAA
GCCTCCATCATAAAAAAATTCCTCGCGTGTTACTACAATGGTTAAAAATGAACTTAAACAAAAAGTATCCTATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGAAATAAGTCAGTTGTTGAAAGGGTTGGATAATAGAATCGATGGCGTGCATGC
AGAAGATTCGATGAGAAAAGAAAAAGTAGCATCTTTCAGAAAGGGAGACATTCCGTTATTAGTTACAACGACAATTTTAG
AAAGAGGAGTAACTGTGAAGAACTTACAAGTGGCTGTGTTAGGAGCTGAAGAAGAAATTTTTTCAGAGAGTGCGCTCGTA
CAAATTGCAGGCCGAGCGGGGCGTAGTTTTGAAGAGCCATATGGTGAGGTTATGTATTTTCATTACGGTAAGACAGAGGC
AATGGTACGCGCGAAAAAACATATTCAAAGTATGAATAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Type III restriction enzyme, res subunit (ResIII) (110-254)

• Helicase conserved C-terminal domain (Helicase_C) (311-408)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	52.392	93.096	0.488
comFA	Latilactobacillus sakei subsp. sakei 23K	40	90.2	0.361