Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   PSR14_RS20910 Genome accession   NZ_CP117702
Coordinates   3969335..3969793 (+) Length   152 a.a.
NCBI ID   WP_000804868.1    Uniprot ID   A0A0J1HZV6
Organism   Bacillus sp. A01H     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3964335..3974793
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PSR14_RS20895 (PSR14_20885) - 3964992..3965228 (+) 237 WP_000283743.1 hypothetical protein -
  PSR14_RS20900 (PSR14_20890) - 3965402..3967509 (-) 2108 Protein_4063 polyphosphate kinase -
  PSR14_RS20905 (PSR14_20895) ppx 3967618..3969156 (-) 1539 WP_000658870.1 exopolyphosphatase -
  PSR14_RS20910 (PSR14_20900) kre 3969335..3969793 (+) 459 WP_000804868.1 YkyB family protein Regulator
  PSR14_RS20915 (PSR14_20905) - 3969825..3970487 (-) 663 WP_098487746.1 YkyA family protein -
  PSR14_RS20920 (PSR14_20910) - 3971137..3971778 (-) 642 WP_000680835.1 diguanylate cyclase domain-containing protein -
  PSR14_RS20925 (PSR14_20915) - 3972148..3973377 (+) 1230 WP_098487274.1 IS110 family transposase -
  PSR14_RS20930 (PSR14_20920) - 3973676..3973921 (+) 246 Protein_4069 hypothetical protein -
  PSR14_RS20935 (PSR14_20925) - 3973861..3974361 (-) 501 WP_000708168.1 hypothetical protein -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17787.52 Da        Isoelectric Point: 10.6793

>NTDB_id=787138 PSR14_RS20910 WP_000804868.1 3969335..3969793(+) (kre) [Bacillus sp. A01H]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=787138 PSR14_RS20910 WP_000804868.1 3969335..3969793(+) (kre) [Bacillus sp. A01H]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAATCCGAAGTATTTATACTGGTTAAAAAAGACAGCTTTAGAACGCTTAATTACTGAAA
AAAAAGCTATTAAAGAAGGATTACATTTCTCTAGAAATCCACGTTTTAGCCAACAACAATCTGATGTTCTTATACGTTTA
GGTGATTACTTTTTCCATATTCCTCCTACAAAAGAAGATTTTCGAATCCTACCACATCTCGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCGCTAAAAC
AAGAAAAGAAATTAAGTGAACCTGTCCCATGGTATAGTCGTACCTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0J1HZV6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493