Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   PSR14_RS06750 Genome accession   NZ_CP117702
Coordinates   1273412..1273588 (+) Length   58 a.a.
NCBI ID   WP_098487496.1    Uniprot ID   -
Organism   Bacillus sp. A01H     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1268412..1278588
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PSR14_RS06730 (PSR14_06735) clpC 1268745..1271345 (+) 2601 WP_098487491.1 ATP-dependent chaperone ClpB Regulator
  PSR14_RS06735 (PSR14_06740) - 1271383..1271565 (-) 183 WP_001211114.1 YjzD family protein -
  PSR14_RS06740 (PSR14_06745) - 1271722..1272456 (+) 735 WP_000028705.1 hypothetical protein -
  PSR14_RS06745 (PSR14_06750) - 1272486..1273358 (+) 873 WP_000486163.1 NAD(P)-dependent oxidoreductase -
  PSR14_RS06750 (PSR14_06755) comZ 1273412..1273588 (+) 177 WP_098487496.1 ComZ family protein Regulator
  PSR14_RS06755 (PSR14_06760) fabH 1273831..1274763 (+) 933 WP_001100541.1 beta-ketoacyl-ACP synthase III -
  PSR14_RS06760 (PSR14_06765) fabF 1274795..1276033 (+) 1239 WP_000412651.1 beta-ketoacyl-ACP synthase II -
  PSR14_RS06765 (PSR14_06770) - 1276140..1276928 (+) 789 WP_000539323.1 DUF2268 domain-containing protein -
  PSR14_RS06770 (PSR14_06775) - 1277072..1277818 (+) 747 WP_098487492.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6604.75 Da        Isoelectric Point: 4.4797

>NTDB_id=787124 PSR14_RS06750 WP_098487496.1 1273412..1273588(+) (comZ) [Bacillus sp. A01H]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKARPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=787124 PSR14_RS06750 WP_098487496.1 1273412..1273588(+) (comZ) [Bacillus sp. A01H]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCGCTTGATATGGAGAAAGCTCGACCTGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

94.828

0.569