Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   OO714_RS05060 Genome accession   NZ_AP025740
Coordinates   1099024..1099965 (+) Length   313 a.a.
NCBI ID   WP_001210788.1    Uniprot ID   Q56UR7
Organism   Acinetobacter baumannii strain ATCC 19606     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1094024..1104965
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OO714_RS05050 (KAMO5_10040) basA 1094447..1096294 (+) 1848 WP_000910263.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -
  OO714_RS05055 (KAMO5_10050) basB 1096365..1098392 (-) 2028 WP_000939830.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  OO714_RS05060 (KAMO5_10070) ceuB 1099024..1099965 (+) 942 WP_001210788.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  OO714_RS05065 (KAMO5_10080) bauC 1099965..1100912 (+) 948 WP_001223275.1 ferric acinetobactin ABC transporter permease subunit BauC -
  OO714_RS05070 (KAMO5_10090) bauE 1100909..1101679 (+) 771 WP_000582118.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  OO714_RS05075 (KAMO5_10100) bauB 1101686..1102654 (+) 969 WP_001104129.1 siderophore-binding periplasmic lipoprotein BauB -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 34021.11 Da        Isoelectric Point: 8.6941

>NTDB_id=78705 OO714_RS05060 WP_001210788.1 1099024..1099965(+) (ceuB) [Acinetobacter baumannii strain ATCC 19606]
MRFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIIQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=78705 OO714_RS05060 WP_001210788.1 1099024..1099965(+) (ceuB) [Acinetobacter baumannii strain ATCC 19606]
ATGCGATTTGGCTTATTCTGTATTTTTATCATTTTATGTATTTGTTCGTTATTGCTCGGGGCTGAACAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATTCCTCGTTTAATTACTATTGTGCTTA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAATTTGTTGAACCGGAAACGTCGGGC
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCGGTAACCAGCACGCTGAGTAAAATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGCCGGATCCGTTTTAGAAATACGGTTTTAG
TACCGGTTATTGGCTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTATCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTTGCACACCGCTTTACCGTAATTGGTATGGGTGAAGAGATGGCTTCTAGCTTAGGACTTA
GTTATGCAGCTATAGCCGCCATTGGTTTAATACTGGTTGCCATTACAGTTTCAACCACAGTGATTACTGTTGGTGCCATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTGGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCCATTGTGGC
TTTGGGTGGAGCGTCTCTATTACTGATTTGCGACATTCTTGGTCGCTCGATTATTTATCCATTTGAAGTGCCAATTGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q56UR7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.257

94.569

0.419

Multiple sequence alignment