Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG472_RS25275 Genome accession   NZ_CP130715
Coordinates   5329369..5330493 (-) Length   374 a.a.
NCBI ID   WP_361769502.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00207     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5324369..5335493
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG472_RS25250 (OG472_25165) cseB 5324937..5325650 (-) 714 WP_401610906.1 two-component system response regulator CseB -
  OG472_RS25255 (OG472_25170) - 5325680..5326375 (-) 696 WP_401610904.1 hypothetical protein -
  OG472_RS25260 (OG472_25175) - 5326363..5326923 (-) 561 WP_030010715.1 SigE family RNA polymerase sigma factor -
  OG472_RS25265 (OG472_25180) - 5327221..5328138 (-) 918 WP_401610902.1 A/G-specific adenine glycosylase -
  OG472_RS25270 (OG472_25185) - 5328493..5329299 (+) 807 WP_405831369.1 hypothetical protein -
  OG472_RS25275 (OG472_25190) disA 5329369..5330493 (-) 1125 WP_361769502.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG472_RS25280 (OG472_25195) radA/sms 5330667..5332079 (-) 1413 WP_401610898.1 DNA repair protein RadA Machinery gene
  OG472_RS25285 (OG472_25200) - 5332261..5334057 (+) 1797 WP_405831372.1 BACON domain-containing protein -
  OG472_RS25290 (OG472_25205) - 5334125..5334982 (-) 858 WP_401610894.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40352.32 Da        Isoelectric Point: 4.9472

>NTDB_id=787016 OG472_RS25275 WP_361769502.1 5329369..5330493(-) (disA) [Streptomyces sp. NBC_00207]
MAAKDGAAASGKSGASSKQEAMMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKSVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVDEALAELDALTHPELLELAIVAKALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=787016 OG472_RS25275 WP_361769502.1 5329369..5330493(-) (disA) [Streptomyces sp. NBC_00207]
GTGGCAGCCAAGGACGGGGCAGCAGCATCCGGCAAGTCGGGCGCCAGCTCCAAGCAGGAGGCCATGATGCGCGCCTCGCT
GAGCGCGGTCGCACCTGGTCAGCCGCTGCGTGACGGCTTGGAGCGGATCGTCCGCGGCAACACCGGCGGGCTCATCGTCC
TCGGCATGGACAAGTCCGTCGAGGCCATGTGCACCGGTGGTTTCGTCCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTCATCCTCGACAAGGACATCACCAAGATCCTGCGGGCCGGCGTGCAGCTGGTGCC
GGACGCCTCGATCCCGACCGAGGAGACCGGTACGCGTCACCGCACGGCGGACCGCGTCTCCAAGCAGTGCGGCTTCCCGG
TCGTCTCCGTCTCCCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGGGAGCGGCGCGTCCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGGGCGAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTGCGCCTCGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTCACGGTCCGCGACGTGACGGCGGTGGCGCAGCGGCTGGAAATGGTCCGCCGGATCG
CGACCGAGATCGCCGAGTACGTGGTCGAACTGGGCACGGACGGGCGACTTCTGTCGCTGCAGCTGGACGAGCTGACGGTC
GGCATCGAGCAGGAGCGGGAGCTCGTCATCCGGGACTACGTCCCGGAGCCGACGGCGAAGCGTTCCCGCACGGTGGACGA
GGCGCTGGCGGAACTGGACGCGCTGACGCATCCGGAGCTGCTGGAGCTGGCGATCGTGGCGAAGGCGCTGGGGTACACGG
GCTCGCCGGAGACCCTGGACTCGGCGGTGTCGCCCCGCGGGTACCGGCTGCTGGCGAAGGTGCCGAGGCTGCCGGGCGCG
ATCATCGAGCGGCTCGTGGAGCACTTCGGGGGGCTGCAGAAGCTGCTCGCCGCGAGCGTCGACGACCTGCAGACGGTGGA
CGGGGTCGGCGAGGCGCGTGCGCGCAGCGTCCGCGAGGGCCTCTCCCGCCTGGCGGAGTCCTCGATCCTCGAGCGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.26

96.524

0.447