Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   PSR56_RS03555 Genome accession   NZ_CP117689
Coordinates   664522..664716 (+) Length   64 a.a.
NCBI ID   WP_013081746.1    Uniprot ID   A0A8D3X5H5
Organism   Priestia megaterium strain GEB3     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 659522..669716
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PSR56_RS03530 (PSR56_03530) galT 659587..661110 (+) 1524 WP_310884195.1 UDP-glucose--hexose-1-phosphate uridylyltransferase -
  PSR56_RS03535 (PSR56_03535) - 661153..662037 (-) 885 WP_033578041.1 NAD(P)-dependent oxidoreductase -
  PSR56_RS03540 (PSR56_03540) - 662241..662429 (-) 189 WP_028412377.1 YjzD family protein -
  PSR56_RS03545 (PSR56_03545) - 662639..663379 (+) 741 WP_013055401.1 hypothetical protein -
  PSR56_RS03550 (PSR56_03550) - 663561..664445 (+) 885 WP_275211619.1 NAD(P)-dependent oxidoreductase -
  PSR56_RS03555 (PSR56_03555) comZ 664522..664716 (+) 195 WP_013081746.1 ComZ family protein Regulator
  PSR56_RS03560 (PSR56_03560) - 664745..664945 (-) 201 WP_028412375.1 hypothetical protein -
  PSR56_RS03565 (PSR56_03565) - 665202..666140 (+) 939 WP_013081747.1 beta-ketoacyl-ACP synthase III -
  PSR56_RS03570 (PSR56_03570) fabF 666180..667421 (+) 1242 WP_028412374.1 beta-ketoacyl-ACP synthase II -
  PSR56_RS03575 (PSR56_03575) - 667528..668301 (+) 774 WP_016763040.1 DUF2268 domain-containing protein -
  PSR56_RS03580 (PSR56_03580) - 668528..669550 (+) 1023 WP_048021969.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7357.39 Da        Isoelectric Point: 3.9484

>NTDB_id=786968 PSR56_RS03555 WP_013081746.1 664522..664716(+) (comZ) [Priestia megaterium strain GEB3]
MEEQNMQFMQIAMKYLPEAKQILDETGVELSMEHVQPVLTLLTKVMNDAYELGKQDALAENENN

Nucleotide


Download         Length: 195 bp        

>NTDB_id=786968 PSR56_RS03555 WP_013081746.1 664522..664716(+) (comZ) [Priestia megaterium strain GEB3]
ATGGAAGAGCAAAATATGCAATTCATGCAAATTGCAATGAAGTACTTGCCAGAAGCAAAGCAGATTTTAGATGAAACAGG
CGTTGAGTTATCAATGGAACACGTACAGCCGGTATTGACATTACTGACAAAAGTAATGAACGACGCCTATGAGCTTGGCA
AGCAAGATGCATTAGCTGAAAATGAAAACAACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

93.75

0.563