Detailed information NTG0786550

Bioinformatically predicted

Overview

• Name: sxy/tfoX
• Type: Regulator
• Locus tag: PS051_RS15210
• Genome accession: NZ_CP117590
• Coordinates: 2994455..2995084 (-)
• Length: 209 a.a.
• NCBI ID: WP_059219814.1
• Uniprot ID: -
• Organism: Escherichia albertii strain BIA_36
• Function: positive regulator of competence gene (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
ICE	2980546..2994884	2994455..2995084	flank	-429

Gene organization within MGE regions

Location: 2980546..2995084

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PS051_RS15140 (PS051_15140)	-	2980609..2983089 (+)	2481	WP_273781038.1	exonuclease	-
PS051_RS15145 (PS051_15145)	-	2983156..2983407 (+)	252	WP_000273158.1	DUF4224 domain-containing protein	-
PS051_RS15150 (PS051_15150)	-	2983376..2984395 (+)	1020	WP_024227504.1	tyrosine-type recombinase/integrase	-
PS051_RS15155 (PS051_15155)	yccA	2984804..2985463 (+)	660	WP_000375136.1	FtsH protease modulator YccA	-
PS051_RS15160 (PS051_15160)	tusE	2985555..2985884 (+)	330	WP_024164819.1	sulfurtransferase TusE	-
PS051_RS15165 (PS051_15165)	yccX	2985881..2986159 (-)	279	WP_000048219.1	acylphosphatase	-
PS051_RS15170 (PS051_15170)	rlmI	2986253..2987443 (+)	1191	WP_273781040.1	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	-
PS051_RS15175 (PS051_15175)	hspQ	2987501..2987818 (+)	318	WP_001295356.1	heat shock protein HspQ	-
PS051_RS15180 (PS051_15180)	-	2987863..2988276 (-)	414	WP_002462360.1	CoA-binding protein	-
PS051_RS15185 (PS051_15185)	-	2988449..2989111 (+)	663	WP_273781041.1	DUF2057 family protein	-
PS051_RS15190 (PS051_15190)	mgsA	2989207..2989665 (+)	459	WP_000424182.1	methylglyoxal synthase	-
PS051_RS15195 (PS051_15195)	helD	2989697..2991751 (-)	2055	WP_059268486.1	DNA helicase IV	-
PS051_RS15200 (PS051_15200)	-	2991874..2992320 (+)	447	WP_001261228.1	YccF domain-containing protein	-
PS051_RS15205 (PS051_15205)	yccS	2992330..2994495 (+)	2166	WP_072243494.1	YccS family putative transporter	-
PS051_RS15210 (PS051_15210)	sxy/tfoX	2994455..2995084 (-)	630	WP_059219814.1	TfoX/Sxy family DNA transformation protein	Regulator

Sequence

Protein

• Length: 209 a.a.
• Molecular weight: 24362.39 Da
• Isoelectric Point: 9.2220

>NTDB_id=786550 PS051_RS15210 WP_059219814.1 2994455..2995084(-) (sxy/tfoX) [Escherichia albertii strain BIA_36]
MKKLSYKRIYKSQEYLAMLGTIEYRSLFGSYSLTVNDTVFAMVADGELYLRACEQSVQYCVKHPPVWLTYKKCGRPVTLN
YYRVDESLWRNQQKLVRLSKYSLDAALKEKCTRNNLQRLKDLPNMSYHLEAILGEVGIKDVRTLRILGAKMCWLRLRQHN
SQVTEKILFMLEGAIIDIHEAALPVARRQELAEWAESIVPKPEFPTEPE

Nucleotide

• Length: 630 bp

>NTDB_id=786550 PS051_RS15210 WP_059219814.1 2994455..2995084(-) (sxy/tfoX) [Escherichia albertii strain BIA_36]
ATGAAAAAGCTCTCCTATAAGCGGATCTATAAGTCACAAGAATACCTTGCAATGTTAGGCACCATTGAATATCGATCGCT
GTTTGGCAGTTACAGTTTGACGGTTAACGATACGGTATTTGCGATGGTTGCTGATGGTGAGTTGTATCTACGGGCTTGTG
AACAAAGCGTACAGTACTGTGTAAAACATCCGCCAGTCTGGCTGACATATAAAAAGTGTGGCCGACCCGTGACTCTCAAT
TACTACCGGGTTGATGAAAGTCTATGGCGTAACCAACAGAAATTAGTTCGCTTGTCGAAATATTCCCTGGATGCTGCGCT
GAAAGAGAAATGTACGCGCAACAATCTCCAGCGACTGAAAGATTTGCCGAATATGTCTTATCACCTGGAGGCGATTCTCG
GTGAAGTGGGGATCAAGGATGTGCGGACTTTACGGATCCTTGGCGCAAAAATGTGCTGGTTGCGACTACGTCAGCATAAT
AGCCAGGTGACGGAGAAGATCTTATTCATGCTTGAAGGCGCAATTATTGATATTCATGAAGCAGCGCTCCCGGTAGCACG
CCGCCAGGAGCTTGCTGAATGGGCTGAATCTATTGTGCCGAAACCGGAGTTTCCGACGGAACCTGAGTAA

Domains

Predicted by InterproScan.

• TfoX C-terminal domain (TfoX_C) (117-194)

• TfoX N-terminal domain (TfoX_N) (14-106)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sxy/tfoX	Escherichia coli BW25113 strain K-12	89.474	100	0.895