Detailed information NTG0786431

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: Q4S51_RS00895
• Genome accession: NZ_CP130667
• Coordinates: 199610..200593 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain SM107
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 194610..205593

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q4S51_RS00875 (Q4S51_00875)	dppA	195753..197360 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
Q4S51_RS00880 (Q4S51_00880)	-	197423..197650 (-)	228	WP_032153267.1	hypothetical protein	-
Q4S51_RS00885 (Q4S51_00885)	dppB	197668..198687 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
Q4S51_RS00890 (Q4S51_00890)	dppC	198697..199599 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
Q4S51_RS00895 (Q4S51_00895)	amiE	199610..200593 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
Q4S51_RS00900 (Q4S51_00900)	dppF	200590..201594 (+)	1005	WP_000107036.1	dipeptide ABC transporter ATP-binding subunit DppF	-
Q4S51_RS00905 (Q4S51_00905)	yhjV	201624..202895 (-)	1272	WP_021557305.1	aromatic amino acid transport family protein	-
Q4S51_RS00910 (Q4S51_00910)	-	203371..203478 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
Q4S51_RS00915 (Q4S51_00915)	-	203854..203961 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
Q4S51_RS00920 (Q4S51_00920)	-	204337..204444 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=786431 Q4S51_RS00895 WP_001196486.1 199610..200593(+) (amiE) [Escherichia coli strain SM107]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=786431 Q4S51_RS00895 WP_001196486.1 199610..200593(+) (amiE) [Escherichia coli strain SM107]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTGAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCCGGTCAGGTGGTGGAAACGGGCGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCATCGTTGCCTGGCGTTGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404