Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   Q4V64_RS13505 Genome accession   NZ_CP130630
Coordinates   3099652..3100713 (+) Length   353 a.a.
NCBI ID   WP_124442890.1    Uniprot ID   -
Organism   Streptomyces sp. NL15-2K     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 3094652..3105713
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q4V64_RS13475 (Q4V64_13470) - 3094758..3095441 (-) 684 WP_124442896.1 response regulator transcription factor -
  Q4V64_RS13480 (Q4V64_13475) - 3095438..3096667 (-) 1230 WP_124442895.1 histidine kinase -
  Q4V64_RS13485 (Q4V64_13480) - 3096775..3097059 (-) 285 WP_124442894.1 hypothetical protein -
  Q4V64_RS13490 (Q4V64_13485) - 3097099..3097893 (-) 795 WP_124442893.1 PspA/IM30 family protein -
  Q4V64_RS13495 (Q4V64_13490) - 3098145..3098774 (+) 630 WP_124442892.1 DUF3043 domain-containing protein -
  Q4V64_RS13500 (Q4V64_13495) - 3098858..3099595 (+) 738 WP_124442891.1 methyltransferase domain-containing protein -
  Q4V64_RS13505 (Q4V64_13500) htrA 3099652..3100713 (+) 1062 WP_124442890.1 trypsin-like peptidase domain-containing protein Regulator
  Q4V64_RS13510 (Q4V64_13505) - 3100768..3100983 (-) 216 WP_124442889.1 hypothetical protein -
  Q4V64_RS13515 (Q4V64_13510) - 3101220..3102422 (+) 1203 WP_124442888.1 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase -
  Q4V64_RS13520 (Q4V64_13515) - 3102411..3103109 (-) 699 WP_124442887.1 class I SAM-dependent methyltransferase -
  Q4V64_RS13525 (Q4V64_13520) cobT 3103270..3104379 (+) 1110 WP_124442886.1 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase -
  Q4V64_RS13530 (Q4V64_13525) - 3104422..3105186 (-) 765 WP_124442885.1 hypothetical protein -

Sequence


Protein


Download         Length: 353 a.a.        Molecular weight: 35823.84 Da        Isoelectric Point: 4.3341

>NTDB_id=786253 Q4V64_RS13505 WP_124442890.1 3099652..3100713(+) (htrA) [Streptomyces sp. NL15-2K]
MDASRTRALRLVAVLACSVALLSGCTGSDSSGERENPTTQAAVPAVDSDLQSDYQKVIRDVLPSVVQIQARSDLGSGVVY
DGRGHIVTNAHVVGDEKTFQVTTANSEDALDATLVYSYPEQDLAVIKLDRVPGGLRAASFGDSSKVEVGQIVLAMGSPLG
LSSSVTQGIVSATGRTVTETQADGGTGATIADMVQTSAAINPGNSGGALVNLDGQVIGIPTLAATDPGLGDSAAPGIGFA
IPASTVRTIADQIVKQGRVTDSGRAGLGITGRTVVDDDYRAAGVAVVEVTGGGAADKAGIEAGDVITKLGDTDITTITSL
TEALAARRPGDRTSVTFTRNGDERTVEVTLGER

Nucleotide


Download         Length: 1062 bp        

>NTDB_id=786253 Q4V64_RS13505 WP_124442890.1 3099652..3100713(+) (htrA) [Streptomyces sp. NL15-2K]
ATGGATGCCTCTCGTACCCGTGCCCTGCGGCTGGTCGCCGTGCTCGCGTGTTCCGTCGCGCTCCTGTCCGGATGCACCGG
ATCGGATTCCTCCGGCGAGCGGGAGAACCCGACCACACAGGCCGCCGTTCCCGCCGTGGACAGCGATCTGCAGAGCGACT
ACCAGAAGGTGATCAGGGACGTTCTGCCGTCGGTCGTGCAGATCCAGGCCAGGAGCGATCTCGGGTCGGGCGTCGTGTAC
GACGGCCGGGGGCACATCGTCACCAACGCCCATGTCGTCGGGGACGAGAAGACCTTCCAGGTGACGACCGCCAACAGCGA
GGACGCCCTCGACGCGACACTCGTCTACTCGTACCCCGAGCAGGATCTCGCCGTCATCAAGCTGGACCGGGTTCCGGGCG
GGCTGAGGGCCGCGTCCTTCGGGGACTCCTCGAAGGTGGAGGTGGGGCAGATCGTCCTCGCCATGGGCTCGCCGCTCGGG
CTGTCGTCCAGCGTGACGCAGGGGATCGTGTCGGCGACCGGGCGGACCGTCACCGAGACCCAGGCGGACGGCGGTACGGG
CGCGACCATCGCCGACATGGTGCAGACCTCGGCCGCCATCAACCCCGGCAACAGCGGGGGTGCGCTGGTGAACCTCGACG
GGCAGGTCATCGGCATCCCGACGCTCGCCGCCACCGACCCCGGCCTCGGGGACAGCGCGGCGCCCGGCATCGGGTTCGCG
ATCCCGGCGTCGACGGTGAGGACCATCGCCGACCAGATCGTCAAGCAGGGCAGGGTCACCGACTCGGGACGGGCCGGGCT
CGGCATCACCGGTCGTACGGTCGTCGACGACGACTACCGGGCCGCCGGGGTGGCCGTGGTCGAGGTGACGGGCGGTGGGG
CCGCCGACAAGGCCGGCATCGAGGCCGGGGACGTCATCACCAAGTTGGGTGACACGGACATCACCACCATCACCTCGCTG
ACCGAGGCGCTGGCTGCCCGGAGGCCGGGCGACAGGACATCGGTCACCTTCACGCGCAACGGCGATGAGAGAACCGTGGA
GGTGACCCTGGGTGAGCGGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mitis NCTC 12261

33.077

100

0.365