Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   PGW99_RS01460 Genome accession   NZ_CP117520
Coordinates   296484..298706 (-) Length   740 a.a.
NCBI ID   WP_273778322.1    Uniprot ID   -
Organism   Acinetobacter sp. GSS19     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 291484..303706
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PGW99_RS01440 - 292161..292499 (-) 339 WP_273778315.1 chaperone modulator CbpM -
  PGW99_RS01445 - 292510..293466 (-) 957 WP_273778318.1 DnaJ C-terminal domain-containing protein -
  PGW99_RS01450 - 293638..294513 (-) 876 WP_273778319.1 Hsp33 family molecular chaperone HslO -
  PGW99_RS01455 - 294564..296402 (-) 1839 WP_273778320.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  PGW99_RS01460 priA 296484..298706 (-) 2223 WP_273778322.1 primosomal protein N' Machinery gene
  PGW99_RS01465 - 299133..299468 (+) 336 WP_273778323.1 hypothetical protein -
  PGW99_RS01470 lnt 299528..301087 (-) 1560 WP_273778324.1 apolipoprotein N-acyltransferase -
  PGW99_RS01475 - 301084..301923 (-) 840 WP_273778325.1 CBS domain-containing protein -
  PGW99_RS01480 tusA 302109..302366 (+) 258 WP_273778326.1 sulfurtransferase TusA -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 84037.11 Da        Isoelectric Point: 8.8939

>NTDB_id=786213 PGW99_RS01460 WP_273778322.1 296484..298706(-) (priA) [Acinetobacter sp. GSS19]
MPNPVDASAVVYRVRVAVPVHLYDCFDYMLSAEQYQLAQPGARVAVSFGRQNLIGLIVEKLALDTPLDPNIKLKAITELL
DEQPILDAKVLTLLNWAAQYYQFPIGEVMQTALPALLRQGKPLNLLARTWTLLDQQADSKISRSSKQQEAYRILKLHPVG
TAENILNLNGIETATLKALEKKGIVQCLLENQDFSPEPVQLAHMPLTPNPDQHKAIQQILKAQHKYQAFLLDGLTGSGKT
EVYLQVMHEVLKQGKQVLVLVPEIGLTPQTISRFQSRFHCHMAVLHSGLNDSKRLKAWRDAQSGRASIILGTRSAIYTPL
PQLGLVILDEEHDLSFKQQEGFRYHARDVALYRAHLENCPIILGSATPSIDSYHLAEQGKLTRLELNQRAGNALLPKMHL
IDVKIAKKQHGLSQQLIEQIQLRLERKEQVLVFLNRRGYAPVLICESCGWQANCPHCDAHFTLHTQPYSHLHCHHCGSIH
RLPEQCPSCQQTTLKPIGMGTAKVEENLQTLFPHYDVIRVDRDSTSKVGSWQKIYDRIQQSKPTILLGTQMLAKGHHFPY
VTLVAILDIDAGLLSVDFRATERTAQLIVQVAGRAGRGEHKGEVYLQTLRPDHPLLNTLIKEDYRAFAKQTLKDRKLALL
PPYRYAMLVRCESRQQEQNQQFLQQQAELLRQRSNGEIEIWGPIPAPMERKAGRYQAHMVLLAKDRAHLHFYSRPWWQQL
LHERPSQMKMSIDVDPQELS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=786213 PGW99_RS01460 WP_273778322.1 296484..298706(-) (priA) [Acinetobacter sp. GSS19]
ATGCCAAATCCTGTTGATGCCAGCGCTGTTGTTTATCGTGTACGTGTTGCTGTACCAGTGCATCTCTATGATTGTTTTGA
CTATATGCTCAGTGCAGAACAGTATCAGCTGGCTCAACCTGGTGCACGTGTGGCGGTGTCTTTTGGTCGGCAAAATCTGA
TTGGTCTGATTGTTGAAAAACTGGCACTGGACACCCCGCTCGATCCAAATATCAAACTGAAAGCCATTACCGAACTGTTA
GATGAACAGCCGATCTTAGATGCAAAAGTTCTCACCCTTTTAAACTGGGCCGCCCAGTATTATCAATTTCCCATCGGTGA
AGTGATGCAAACTGCGCTGCCTGCCTTGTTACGGCAAGGTAAACCGCTCAATCTGCTGGCACGAACCTGGACCTTGCTGG
ATCAGCAAGCGGATAGCAAGATTAGTCGTTCAAGCAAGCAGCAAGAGGCCTACCGGATTTTGAAATTGCATCCCGTTGGG
ACTGCAGAAAATATTTTGAATTTGAACGGGATTGAAACCGCAACCCTCAAGGCGCTGGAAAAAAAAGGCATTGTGCAGTG
CCTGCTGGAAAACCAGGATTTCTCGCCTGAACCGGTGCAGTTGGCACACATGCCGTTAACCCCCAATCCAGATCAGCACA
AAGCCATCCAACAGATTCTCAAAGCTCAGCATAAATATCAGGCTTTTTTACTCGATGGCCTGACGGGGAGTGGCAAAACT
GAAGTGTATCTGCAAGTGATGCATGAGGTACTCAAACAGGGCAAACAGGTACTGGTCTTGGTTCCGGAAATTGGCCTGAC
ACCACAAACCATCAGCCGTTTTCAGTCACGCTTCCATTGCCATATGGCGGTTTTACATTCCGGGCTGAATGACAGCAAGC
GCTTGAAAGCCTGGCGCGATGCACAAAGTGGCAGAGCTTCAATTATCTTAGGAACACGTTCAGCAATTTATACGCCACTG
CCACAGTTGGGTCTGGTGATTCTCGATGAAGAACATGACCTATCTTTTAAGCAACAAGAAGGCTTCCGTTACCACGCACG
GGATGTCGCGCTATACCGGGCACATCTAGAAAACTGTCCCATCATTTTGGGATCAGCCACTCCAAGCATTGACAGCTATC
ATCTGGCAGAACAAGGCAAACTGACCCGTCTTGAGCTGAACCAGCGTGCTGGCAATGCCCTGTTACCCAAAATGCACCTG
ATCGATGTAAAAATTGCCAAAAAGCAACATGGACTGAGTCAACAACTCATCGAGCAAATTCAACTCCGCCTAGAACGCAA
AGAACAGGTACTGGTGTTTCTGAACCGTCGCGGTTATGCCCCTGTACTAATCTGTGAAAGCTGTGGCTGGCAGGCCAACT
GCCCACACTGTGATGCGCATTTTACCCTGCATACACAGCCCTACTCACATTTGCACTGCCATCATTGTGGCAGCATTCAT
CGTCTACCAGAACAATGTCCTTCCTGCCAGCAGACTACGCTCAAACCGATTGGTATGGGCACCGCCAAAGTCGAGGAAAA
TTTACAGACCTTGTTCCCGCATTACGACGTGATTCGGGTCGACCGTGACAGTACCAGCAAAGTAGGCAGTTGGCAGAAAA
TTTATGATCGGATCCAGCAGAGTAAACCCACCATCTTACTGGGCACCCAGATGCTGGCCAAAGGCCATCATTTCCCCTAT
GTTACTCTCGTAGCCATTCTGGATATTGATGCTGGCTTGCTCAGTGTCGATTTCCGTGCCACCGAACGTACGGCACAGCT
CATCGTCCAAGTGGCGGGGCGTGCCGGCCGCGGTGAACATAAAGGTGAGGTGTATTTACAGACCCTCAGACCCGATCATC
CCTTACTCAACACGCTGATTAAAGAGGATTATCGTGCCTTTGCCAAACAAACCCTGAAAGACCGCAAACTGGCTCTGTTG
CCCCCTTACCGCTACGCCATGCTAGTACGCTGTGAGTCACGTCAGCAGGAACAGAACCAGCAGTTCTTACAACAACAGGC
CGAGCTGTTGCGCCAACGCTCGAATGGTGAAATTGAAATCTGGGGCCCGATTCCAGCACCGATGGAACGCAAGGCAGGGC
GCTATCAAGCCCACATGGTACTGCTCGCCAAAGATCGGGCACATTTGCATTTTTACAGCCGTCCGTGGTGGCAACAACTA
CTGCATGAACGCCCTTCACAGATGAAAATGTCGATTGATGTGGATCCACAGGAACTGAGTTAA

Domains

Predicted by InterproScan.

DEAD/DEAH box helicase (DEAD)

(210-371)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Primosomal protein N C-terminal domain (PriA_C)

(642-736)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

75.169

100

0.753