Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   GsuE55_RS03705 Genome accession   NZ_AP022557
Coordinates   746577..747524 (+) Length   315 a.a.
NCBI ID   WP_033844030.1    Uniprot ID   A0A679FW13
Organism   Geobacillus subterraneus strain E55-1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 741577..752524
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GsuE55_RS03690 (GsuE55_07410) - 743389..744525 (+) 1137 WP_033844032.1 IS110 family transposase -
  GsuE55_RS03695 (GsuE55_07420) gucD 744685..746151 (+) 1467 WP_033844031.1 alpha-ketoglutaric semialdehyde dehydrogenase GucD -
  GsuE55_RS03700 (GsuE55_07430) - 746159..746323 (+) 165 WP_156102727.1 hypothetical protein -
  GsuE55_RS03705 (GsuE55_07440) ceuB 746577..747524 (+) 948 WP_033844030.1 ABC transporter permease Machinery gene
  GsuE55_RS03710 (GsuE55_07450) - 747517..748467 (+) 951 WP_033844029.1 iron chelate uptake ABC transporter family permease subunit -
  GsuE55_RS03715 (GsuE55_07460) - 748461..749216 (+) 756 WP_033844028.1 ABC transporter ATP-binding protein -
  GsuE55_RS03720 (GsuE55_07470) - 749526..750491 (+) 966 WP_033844027.1 siderophore ABC transporter substrate-binding protein -
  GsuE55_RS03725 (GsuE55_07480) - 750907..751152 (+) 246 WP_033844025.1 hypothetical protein -

Sequence

Protein


Download         Length: 315 a.a.        Molecular weight: 34336.29 Da        Isoelectric Point: 9.4682

>NTDB_id=78606 GsuE55_RS03705 WP_033844030.1 746577..747524(+) (ceuB) [Geobacillus subterraneus strain E55-1]
MKKWILLLVVLSVGSLFVGVHDLSPGALLSGDQAAWEILLISRLPRLISILLAGSSVSICGLIMQQLSQNKFVSPTTAGT
MDWARLGLLVSMILFASAAPLVKAAIAVVFAFVGTLLFMTMLDRIKYKDSVFIPLVGLMFGNIIGSVTMFLAYRYDLIQS
LSAWLHGDFSVMMEGRYETLYVSVPLMGLAYAYANRFTIAGMGEEMATNLGLRYRSVVYAGLLIVAVVSAIEVLTVGTLP
FLGLVVPNLVTMYYGDHLRKVLPLTAVFGALFVLLCDVLGRVVIYPYEIPIGLTVGVIGSGIFLYLLARRTKRYV

Nucleotide


Download         Length: 948 bp        

>NTDB_id=78606 GsuE55_RS03705 WP_033844030.1 746577..747524(+) (ceuB) [Geobacillus subterraneus strain E55-1]
ATGAAAAAGTGGATATTGTTGCTTGTTGTCCTGTCCGTGGGTTCGCTGTTTGTCGGCGTTCATGATTTATCGCCCGGCGC
GCTGCTTTCCGGTGACCAAGCGGCTTGGGAAATTTTGTTGATTAGCCGCTTGCCGCGGCTGATCAGCATTCTTCTTGCCG
GGTCAAGCGTCAGCATTTGCGGCTTGATTATGCAGCAGTTGAGCCAAAACAAATTCGTGTCGCCGACAACCGCGGGAACG
ATGGATTGGGCGCGACTCGGCTTGCTGGTGTCCATGATTTTGTTCGCTTCGGCGGCTCCGCTGGTCAAAGCCGCTATAGC
TGTTGTGTTTGCGTTTGTCGGAACGCTGCTGTTCATGACGATGTTGGATCGCATCAAATATAAAGATTCCGTGTTCATAC
CGCTCGTCGGTTTGATGTTCGGCAACATCATCGGTTCAGTGACGATGTTTTTGGCCTATAGGTACGATTTGATTCAATCG
CTTTCCGCTTGGCTGCACGGCGACTTTTCCGTGATGATGGAGGGGCGCTACGAGACGTTGTATGTGAGCGTCCCGCTGAT
GGGTCTTGCCTATGCATACGCCAATCGTTTTACGATCGCGGGAATGGGAGAGGAGATGGCAACGAATTTAGGGCTTCGCT
ATCGATCGGTTGTGTATGCGGGGCTGCTCATTGTCGCGGTCGTTTCAGCGATTGAAGTGCTGACGGTGGGGACGCTGCCG
TTTTTGGGCTTGGTCGTCCCGAATCTTGTAACGATGTATTACGGTGATCATTTGCGCAAAGTGTTGCCGCTGACAGCGGT
GTTTGGCGCGCTGTTTGTGTTGCTTTGTGATGTATTGGGACGCGTGGTCATCTATCCGTATGAAATTCCGATTGGGTTGA
CGGTCGGGGTGATAGGGAGCGGCATTTTTCTATATTTGCTGGCAAGGAGAACAAAGCGGTATGTCTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(7-309)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A679FW13

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.318

99.683

0.502

Multiple sequence alignment