Detailed information NTG0078533

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: LLL8_RS06050
• Genome accession: NZ_AP025700
• Coordinates: 1226137..1227207 (-)
• Length: 356 a.a.
• NCBI ID: WP_251900429.1
• Uniprot ID: -
• Organism: Lactococcus lactis strain L8
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1221137..1232207

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLL8_RS06035 (LLL8_11760)	dprA	1221435..1222283 (+)	849	WP_251900428.1	DNA-processing protein DprA	Machinery gene
LLL8_RS06040 (LLL8_11770)	topA	1222545..1224677 (+)	2133	WP_003131148.1	type I DNA topoisomerase	-
LLL8_RS06045 (LLL8_11780)	trmFO	1224749..1226092 (+)	1344	WP_003131150.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
LLL8_RS06050 (LLL8_11790)	xerS	1226137..1227207 (-)	1071	WP_251900429.1	tyrosine recombinase XerS	Machinery gene
LLL8_RS06055 (LLL8_11800)	-	1227692..1227979 (-)	288	WP_033899768.1	hypothetical protein	-
LLL8_RS06060 (LLL8_11810)	xerS	1228063..1229118 (-)	1056	WP_251899613.1	tyrosine recombinase XerS	Machinery gene
LLL8_RS06065 (LLL8_11820)	-	1229848..1230765 (-)	918	WP_251899614.1	N(5)-(carboxyethyl)ornithine synthase	-
LLL8_RS06070	-	1230805..1231008 (-)	204	WP_317614872.1	CorA family divalent cation transporter	-
LLL8_RS06075 (LLL8_11830)	-	1231143..1231694 (-)	552	WP_195228714.1	Asp23/Gls24 family envelope stress response protein	-
LLL8_RS06080 (LLL8_11840)	-	1231715..1231903 (-)	189	WP_011835142.1	DUF2273 domain-containing protein	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41399.18 Da
• Isoelectric Point: 9.6568

>NTDB_id=78533 LLL8_RS06050 WP_251900429.1 1226137..1227207(-) (xerS) [Lactococcus lactis strain L8]
MKREQLIQNIEKLKHIMPSYVLEYYQSKLTIPYSLNTLYEYLKEYERFFSWLVDSGVADVDKITDVSLSVLENLTKRDLE
SFILYLRERPRLNTRSTRYGVSQTTINRTLSALSSLYKYLTEEVENEDGEPYFYRNVMKKVQTKKKSETLASRAENIKGK
LFLGDETQGFLDYIDNEYEKTLSNRARSSFFKNKERDLAIIALILASGIRLSEAVNVDLRDLNLITMVVEVTRKGGKRDA
VPYAPFAKSYFERYLEVRSQRYKTTAKDTAFFVTLYRDVPSRIDPSSVEKLVAKYSQSFKVRVTPHKLRHTLATRLYAQT
NSQVLVSNQLGHASTQVTDLYTHIINEEQKNALDNL

Nucleotide

• Length: 1071 bp

>NTDB_id=78533 LLL8_RS06050 WP_251900429.1 1226137..1227207(-) (xerS) [Lactococcus lactis strain L8]
ATGAAACGTGAACAATTAATACAAAATATTGAAAAACTAAAACATATCATGCCTTCTTATGTTTTAGAATATTATCAATC
TAAACTTACTATTCCTTATAGTTTGAATACACTTTATGAATATCTTAAAGAATATGAACGTTTCTTTAGTTGGTTGGTCG
ATTCTGGAGTTGCTGATGTTGATAAGATAACTGATGTTTCCCTCTCTGTTTTAGAAAACTTAACTAAACGAGATTTGGAG
TCATTTATCCTCTATCTTAGGGAGAGACCCCGTTTAAATACGCGCTCTACTCGTTATGGGGTAAGTCAAACAACAATTAA
TCGTACTCTATCTGCTCTTTCTAGTCTTTATAAATACCTTACTGAAGAGGTTGAAAATGAAGATGGTGAGCCTTACTTCT
ATCGTAATGTTATGAAGAAGGTACAGACTAAGAAAAAATCCGAAACTTTAGCTTCTCGTGCTGAGAATATTAAAGGGAAG
CTTTTTTTGGGAGATGAAACTCAAGGTTTTCTTGACTATATTGATAATGAATATGAAAAAACATTATCAAATAGAGCTCG
TTCTAGTTTTTTCAAAAATAAAGAACGTGATTTAGCAATTATTGCACTTATTTTAGCCTCTGGTATTCGTCTTTCTGAGG
CAGTTAATGTAGATTTAAGAGATTTAAATCTTATTACTATGGTTGTTGAGGTGACTCGTAAAGGAGGAAAAAGGGATGCT
GTTCCTTATGCTCCTTTTGCCAAAAGTTATTTTGAAAGATACTTGGAGGTACGAAGTCAACGTTATAAGACTACAGCGAA
AGATACGGCATTTTTTGTGACACTTTATAGAGATGTTCCTAGCCGAATAGATCCTTCTAGTGTTGAAAAATTAGTTGCTA
AATATTCTCAATCTTTTAAAGTGCGAGTGACCCCTCACAAGCTTAGACATACACTTGCGACTCGACTTTATGCTCAAACA
AATTCTCAGGTATTGGTGAGCAATCAGTTAGGGCATGCTTCAACTCAAGTTACAGACCTCTATACTCATATTATCAATGA
AGAACAAAAAAATGCTCTAGATAATCTATAA

Domains

Predicted by InterProScan.

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

• Phage integrase family (Phage_integrase) (182-344)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	76.685	100	0.767