Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PSH79_RS26045 Genome accession   NZ_CP117445
Coordinates   5802016..5802420 (-) Length   134 a.a.
NCBI ID   WP_305440300.1    Uniprot ID   -
Organism   Pseudomonas sp. FP2196     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5797016..5807420
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PSH79_RS26030 (PSH79_26025) - 5798719..5800779 (-) 2061 WP_305440299.1 methyl-accepting chemotaxis protein -
  PSH79_RS26035 (PSH79_26030) - 5801040..5801579 (-) 540 WP_187679025.1 chemotaxis protein CheW -
  PSH79_RS26040 (PSH79_26035) pilH 5801590..5801955 (-) 366 WP_027926574.1 twitching motility response regulator PilH -
  PSH79_RS26045 (PSH79_26040) pilG 5802016..5802420 (-) 405 WP_305440300.1 twitching motility response regulator PilG Regulator
  PSH79_RS26050 (PSH79_26045) gshB 5802646..5803617 (+) 972 WP_305440302.1 glutathione synthase -
  PSH79_RS26055 (PSH79_26050) - 5803725..5804624 (+) 900 WP_305440303.1 energy transducer TonB -
  PSH79_RS26060 (PSH79_26055) - 5804759..5805331 (+) 573 WP_095186999.1 YqgE/AlgH family protein -
  PSH79_RS26065 (PSH79_26060) ruvX 5805331..5805768 (+) 438 WP_008077844.1 Holliday junction resolvase RuvX -
  PSH79_RS26070 (PSH79_26065) pyrR 5805866..5806372 (+) 507 WP_305440304.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  PSH79_RS26075 (PSH79_26070) - 5806399..5807403 (+) 1005 WP_007913665.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14596.00 Da        Isoelectric Point: 7.1346

>NTDB_id=785301 PSH79_RS26045 WP_305440300.1 5802016..5802420(-) (pilG) [Pseudomonas sp. FP2196]
MEQQSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIVDNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
TTPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIQAHVPGFAAALPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=785301 PSH79_RS26045 WP_305440300.1 5802016..5802420(-) (pilG) [Pseudomonas sp. FP2196]
ATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTGATCGACGACTCGAAAACGATTCGCCGCACCGCCGAAACCCTGTT
GAAAAATGTGGGGTGCGAAGTCATCACGGCGATCGACGGTTTCGACGCATTGGCGAAGATCGTCGACAACCATCCCGGCA
TCATCTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGCGCGTTCAAG
ACAACGCCCGTGATCATGCTGTCGTCCCGGGACGGGTTGTTCGACAAGGCCAAAGGGCGGATTGTCGGTTCTGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCAGCGCTATTCAGGCCCATGTTCCGGGCTTCGCCGCCGCTTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.6

93.284

0.687