Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   Q3V66_RS08620 Genome accession   NZ_CP130543
Coordinates   1799192..1800466 (+) Length   424 a.a.
NCBI ID   WP_001279341.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SA07-SX     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1794192..1805466
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3V66_RS08600 - 1795516..1795611 (+) 96 WP_014937038.1 hypothetical protein -
  Q3V66_RS08605 - 1795572..1796702 (-) 1131 WP_000721712.1 HAD family hydrolase -
  Q3V66_RS08610 nagE 1796809..1798275 (-) 1467 WP_000276349.1 N-acetylglucosamine-specific PTS transporter subunit IIBC -
  Q3V66_RS08615 - 1798403..1799020 (-) 618 WP_000287588.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
  Q3V66_RS08620 htrA 1799192..1800466 (+) 1275 WP_001279341.1 S1C family serine protease Regulator
  Q3V66_RS08625 tyrS 1800560..1801822 (-) 1263 WP_000186029.1 tyrosine--tRNA ligase -
  Q3V66_RS08630 - 1802203..1803108 (+) 906 WP_000184373.1 transglycosylase domain-containing protein -
  Q3V66_RS08635 - 1803088..1803180 (-) 93 WP_014937039.1 hypothetical protein -

Sequence

Protein


Download         Length: 424 a.a.        Molecular weight: 45733.87 Da        Isoelectric Point: 9.8964

>NTDB_id=785225 Q3V66_RS08620 WP_001279341.1 1799192..1800466(+) (htrA) [Staphylococcus aureus strain SA07-SX]
MSDFNHTDHSTTNHSQTPRYRRPKFPWFKTVIVALIAGIIGALLVLGIGKVLNSTILNKDGSTVQTTNNKGGNQLDGQSK
KFGTVHEMIKSVSPTIVGVINMQKASSVDDLLKGKSSKPSEAGVGSGVIYQINNNSAYIVTNNHVIDGANEIRVQLHNKK
QVKAKLVGKDAVTDIAVLKIENTKGIKAIQFANSSKVQTGDSVFAMGNPLGLQFANSVTSGIISASERTIDAETTGGNTK
VSVLQTDAAINPGNSGGALVDINGNLVGINSMKIAATQVEGIGFAIPSNEVKVTIEQLVKHGKIDRPSIGIGLINLKDIP
EEEREQLHTDSEDGIYVAKADSDIDLKKGDIITEIDGKKIKDDVDLRSYLYENKKPGESVTVTVIRDGKTKEVKVKLKQQ
KEQPKRQSRSERQSPGQGDRDFFR

Nucleotide


Download         Length: 1275 bp        

>NTDB_id=785225 Q3V66_RS08620 WP_001279341.1 1799192..1800466(+) (htrA) [Staphylococcus aureus strain SA07-SX]
ATGTCAGATTTTAATCATACAGATCATTCTACAACAAACCATAGCCAAACACCTAGATACAGAAGGCCTAAATTTCCATG
GTTTAAAACAGTCATCGTTGCATTGATTGCTGGAATCATTGGTGCACTTCTAGTACTTGGTATAGGCAAAGTATTAAATA
GTACAATTTTAAATAAAGATGGTTCAACTGTCCAGACAACAAATAATAAAGGTGGCAATCAATTAGACGGTCAAAGCAAG
AAATTCGGTACCGTTCATGAAATGATAAAATCTGTCTCCCCTACAATTGTTGGAGTTATTAACATGCAAAAAGCATCAAG
TGTAGACGACTTATTAAAAGGCAAATCATCTAAACCATCTGAAGCCGGAGTAGGTTCAGGTGTTATCTATCAAATAAACA
ACAATTCAGCTTATATCGTTACAAACAATCATGTTATTGATGGCGCAAATGAAATTAGAGTCCAATTACATAATAAAAAA
CAAGTTAAAGCGAAATTAGTTGGTAAAGATGCAGTAACTGATATTGCTGTACTTAAAATTGAAAATACAAAAGGTATTAA
AGCGATTCAATTCGCCAACTCTTCAAAAGTACAAACTGGCGATAGCGTATTCGCAATGGGTAACCCATTAGGATTACAAT
TTGCTAACTCTGTAACATCTGGTATCATTTCAGCAAGTGAACGTACTATTGACGCAGAGACAACTGGTGGTAATACAAAA
GTCAGCGTTCTTCAAACAGATGCTGCTATTAACCCAGGTAACTCAGGTGGCGCATTAGTAGATATTAATGGTAATTTAGT
TGGTATTAACTCAATGAAAATTGCTGCGACACAAGTTGAAGGTATTGGGTTTGCTATTCCAAGTAATGAAGTTAAAGTAA
CAATTGAACAACTTGTAAAACATGGTAAAATAGACCGCCCTTCGATTGGTATTGGTTTAATTAATTTGAAAGATATACCT
GAAGAAGAGCGCGAGCAACTTCATACTGATAGCGAAGACGGTATTTATGTCGCAAAAGCTGATAGTGATATTGATCTTAA
AAAAGGTGATATTATTACAGAAATTGATGGCAAGAAAATTAAAGATGATGTTGATTTAAGAAGCTATTTATATGAAAATA
AAAAACCTGGTGAATCAGTCACTGTTACCGTTATCCGTGATGGTAAAACAAAAGAAGTTAAAGTGAAATTAAAACAACAA
AAAGAACAACCAAAACGTCAAAGCCGATCAGAACGTCAATCACCTGGCCAAGGCGATAGAGATTTCTTTAGATAA

Domains

Predicted by InterProScan.

PDZ domain (PDZ_2)

(307-397)

Trypsin-like peptidase domain (Trypsin_2)

(125-269)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

38.806

94.811

0.368