Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   Q3V78_RS09735 Genome accession   NZ_CP130538
Coordinates   1963542..1964282 (-) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SA11-SX     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1958542..1969282
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3V78_RS09705 hemE 1958880..1959917 (-) 1038 WP_000233535.1 uroporphyrinogen decarboxylase -
  Q3V78_RS09710 - 1959907..1959993 (-) 87 WP_031875110.1 hypothetical protein -
  Q3V78_RS09715 traP 1960179..1960709 (+) 531 WP_047213579.1 signal transduction protein TRAP -
  Q3V78_RS09720 - 1960799..1962118 (+) 1320 WP_001807150.1 ISL3-like element IS1181 family transposase -
  Q3V78_RS09725 - 1962121..1962198 (+) 78 Protein_1910 hypothetical protein -
  Q3V78_RS09730 - 1962326..1963549 (-) 1224 WP_001245758.1 ABC transporter permease -
  Q3V78_RS09735 pptA 1963542..1964282 (-) 741 WP_000216874.1 ABC transporter ATP-binding protein Regulator
  Q3V78_RS09740 - 1964416..1964838 (+) 423 WP_000004981.1 HIT family protein -
  Q3V78_RS09745 - 1964980..1965345 (+) 366 WP_162649605.1 YtxH domain-containing protein -
  Q3V78_RS09750 - 1966078..1966635 (+) 558 WP_000477959.1 DUF3267 domain-containing protein -
  Q3V78_RS09755 - 1966840..1967802 (+) 963 WP_000782118.1 foldase protein PrsA -
  Q3V78_RS09760 yhaM 1967923..1968864 (-) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=784868 Q3V78_RS09735 WP_000216874.1 1963542..1964282(-) (pptA) [Staphylococcus aureus strain SA11-SX]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=784868 Q3V78_RS09735 WP_000216874.1 1963542..1964282(-) (pptA) [Staphylococcus aureus strain SA11-SX]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATCGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGTCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAATGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACGTTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545