Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PSH84_RS26740 Genome accession   NZ_CP117425
Coordinates   6014643..6015071 (-) Length   142 a.a.
NCBI ID   WP_122567389.1    Uniprot ID   -
Organism   Pseudomonas beijingensis strain FP830     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6009643..6020071
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PSH84_RS26725 (PSH84_26720) - 6011415..6013476 (-) 2062 Protein_5252 methyl-accepting chemotaxis protein -
  PSH84_RS26730 (PSH84_26725) - 6013682..6014221 (-) 540 WP_122567388.1 chemotaxis protein CheW -
  PSH84_RS26735 (PSH84_26730) pilH 6014232..6014597 (-) 366 WP_003206465.1 twitching motility response regulator PilH -
  PSH84_RS26740 (PSH84_26735) pilG 6014643..6015071 (-) 429 WP_122567389.1 twitching motility response regulator PilG Regulator
  PSH84_RS26745 (PSH84_26740) gshB 6015296..6016249 (+) 954 WP_053188919.1 glutathione synthase -
  PSH84_RS26750 (PSH84_26745) - 6016326..6017222 (+) 897 WP_122567390.1 energy transducer TonB -
  PSH84_RS26755 (PSH84_26750) - 6017437..6018006 (+) 570 WP_018609528.1 YqgE/AlgH family protein -
  PSH84_RS26760 (PSH84_26755) ruvX 6018006..6018443 (+) 438 WP_039590497.1 Holliday junction resolvase RuvX -
  PSH84_RS26765 (PSH84_26760) pyrR 6018529..6019035 (+) 507 WP_305468751.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  PSH84_RS26770 (PSH84_26765) - 6019060..6020064 (+) 1005 WP_003177495.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 15507.98 Da        Isoelectric Point: 7.4360

>NTDB_id=784794 PSH84_RS26740 WP_122567389.1 6014643..6015071(-) (pilG) [Pseudomonas beijingensis strain FP830]
MAEHLTQQPSALKVMVIDDSKTIRRTAETLLRNVGCEVITAIDGFDALAKIADHHPGIIFVDIMMPRLDGYQTCALIKNN
SAFKATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLGAIQAHVPGFAAVQPHQAHQ

Nucleotide


Download         Length: 429 bp        

>NTDB_id=784794 PSH84_RS26740 WP_122567389.1 6014643..6015071(-) (pilG) [Pseudomonas beijingensis strain FP830]
ATGGCAGAGCATCTCACGCAGCAACCCAGCGCCTTGAAGGTCATGGTCATCGACGACTCGAAGACCATCCGCCGCACCGC
CGAAACCTTGCTGCGCAACGTGGGCTGCGAGGTGATCACGGCCATCGACGGTTTCGATGCCCTGGCCAAGATCGCCGATC
ATCATCCGGGCATCATCTTCGTCGACATCATGATGCCGCGCCTCGATGGCTACCAGACCTGTGCCCTGATCAAGAACAAC
AGCGCGTTCAAGGCCACGCCGGTGATCATGCTGTCGTCCCGGGATGGGTTGTTCGACAAGGCCAAGGGGCGCATCGTCGG
TTCCGATCAGTTTTTGACCAAGCCGTTCAGCAAGGAAGAACTGCTGGGAGCGATACAGGCCCATGTCCCGGGCTTTGCCG
CTGTCCAGCCGCACCAGGCACATCAATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(14-125)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.119

83.099

0.641