Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   PRK74_RS20205 Genome accession   NZ_CP117421
Coordinates   3969297..3970091 (-) Length   264 a.a.
NCBI ID   WP_021727703.1    Uniprot ID   A0A9X3FF97
Organism   Bacillus cereus strain 2-6A     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 3964297..3975091
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PRK74_RS20180 (PRK74_20180) - 3964821..3966893 (-) 2073 WP_000810974.1 sigma-54 interaction domain-containing protein -
  PRK74_RS20185 (PRK74_20185) - 3967031..3967264 (+) 234 WP_001190214.1 DUF2627 domain-containing protein -
  PRK74_RS20190 (PRK74_20190) - 3967314..3968042 (-) 729 WP_044584836.1 glycerophosphodiester phosphodiesterase -
  PRK74_RS20195 (PRK74_20195) - 3968093..3968239 (+) 147 WP_001247671.1 YycC family protein -
  PRK74_RS20200 (PRK74_20200) - 3968481..3969044 (-) 564 WP_000428236.1 PRK06770 family protein -
  PRK74_RS20205 (PRK74_20205) spo0A 3969297..3970091 (-) 795 WP_021727703.1 sporulation transcription factor Spo0A Regulator
  PRK74_RS20210 (PRK74_20210) spoIVB 3970382..3971680 (-) 1299 WP_002098091.1 SpoIVB peptidase -
  PRK74_RS20215 (PRK74_20215) recN 3971799..3973538 (-) 1740 WP_000947765.1 DNA repair protein RecN Machinery gene
  PRK74_RS20220 (PRK74_20220) argR 3973803..3974252 (-) 450 WP_001032580.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29445.20 Da        Isoelectric Point: 7.1175

>NTDB_id=784732 PRK74_RS20205 WP_021727703.1 3969297..3970091(-) (spo0A) [Bacillus cereus strain 2-6A]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLKQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANTMIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=784732 PRK74_RS20205 WP_021727703.1 3969297..3970091(-) (spo0A) [Bacillus cereus strain 2-6A]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAACTAGTATCAATGTTAGAGAGCTATGTAGCCGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAACAGATAAGCAACCTGATGTACTCG
TTTTAGACATTATTATGCCACACTTAGATGGTTTAGCTGTATTGGAGAAAATGCGACATATTGAAAGGTTAAAACAGCCT
AGCGTAATTATGTTGACAGCATTTGGCCAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCCTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGTGGTAAAGCAAACACTATGATTAAGCGTCCAC
TACCATCATTCCGATCAGCCACAACAGTAGATGGAAAACCGAAAAACTTAGATGCGAGTATTACGAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGATATATGTATTTACGAGAAGCAATCTCCATGGTATACAATGATATTGAATTATT
AGGATCGATTACGAAAGTATTGTATCCAGATATCGCAAAGAAATATAATACAACAGCAAGCCGTGTGGAGCGCGCAATTC
GTCACGCAATTGAAGTAGCTTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCTGAGTTTATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAAGCTAGTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818