Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   Q3V83_RS09600 Genome accession   NZ_CP130534
Coordinates   1958168..1958908 (-) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SA14-SX     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1953168..1963908
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3V83_RS09575 hemH 1954045..1954968 (-) 924 WP_000162888.1 ferrochelatase -
  Q3V83_RS09580 hemE 1955026..1956063 (-) 1038 WP_000233540.1 uroporphyrinogen decarboxylase -
  Q3V83_RS09585 - 1956053..1956139 (-) 87 WP_031875110.1 hypothetical protein -
  Q3V83_RS09590 traP 1956325..1956828 (+) 504 WP_000737983.1 signal transduction protein TRAP -
  Q3V83_RS09595 - 1956952..1958175 (-) 1224 WP_001245766.1 ABC transporter permease -
  Q3V83_RS09600 pptA 1958168..1958908 (-) 741 WP_000216874.1 ABC transporter ATP-binding protein Regulator
  Q3V83_RS09605 - 1959042..1959464 (+) 423 WP_000004981.1 HIT family protein -
  Q3V83_RS09610 - 1959606..1959971 (+) 366 WP_000648118.1 YtxH domain-containing protein -
  Q3V83_RS09615 - 1960704..1961261 (+) 558 WP_000477959.1 DUF3267 domain-containing protein -
  Q3V83_RS09620 - 1961466..1962428 (+) 963 WP_000782119.1 foldase protein PrsA -
  Q3V83_RS09625 yhaM 1962549..1963490 (-) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=784604 Q3V83_RS09600 WP_000216874.1 1958168..1958908(-) (pptA) [Staphylococcus aureus strain SA14-SX]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=784604 Q3V83_RS09600 WP_000216874.1 1958168..1958908(-) (pptA) [Staphylococcus aureus strain SA14-SX]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATCGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACCGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545