Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   Q3V67_RS09135 Genome accession   NZ_CP130533
Coordinates   1881794..1882534 (-) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SA15-SX     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1876794..1887534
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3V67_RS09110 hemH 1877670..1878593 (-) 924 WP_000162881.1 ferrochelatase -
  Q3V67_RS09115 hemE 1878651..1879688 (-) 1038 WP_000233526.1 uroporphyrinogen decarboxylase -
  Q3V67_RS09120 - 1879678..1879788 (-) 111 WP_001790154.1 hypothetical protein -
  Q3V67_RS09125 traP 1879951..1880454 (+) 504 WP_000737978.1 signal transduction protein TRAP -
  Q3V67_RS09130 - 1880578..1881801 (-) 1224 WP_303262325.1 ABC transporter permease -
  Q3V67_RS09135 pptA 1881794..1882534 (-) 741 WP_000216874.1 ABC transporter ATP-binding protein Regulator
  Q3V67_RS09140 - 1882668..1883090 (+) 423 WP_000004988.1 HIT family protein -
  Q3V67_RS09145 - 1883232..1883597 (+) 366 WP_000648118.1 YtxH domain-containing protein -
  Q3V67_RS09150 - 1884330..1884887 (+) 558 WP_000477959.1 DUF3267 domain-containing protein -
  Q3V67_RS09155 - 1885092..1886054 (+) 963 WP_000782121.1 foldase protein PrsA -
  Q3V67_RS09160 yhaM 1886175..1887116 (-) 942 WP_001244171.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=784511 Q3V67_RS09135 WP_000216874.1 1881794..1882534(-) (pptA) [Staphylococcus aureus strain SA15-SX]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=784511 Q3V67_RS09135 WP_000216874.1 1881794..1882534(-) (pptA) [Staphylococcus aureus strain SA15-SX]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTACTGTGATCGTTTTATCATACTTGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545