Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   Q3V90_RS09360 Genome accession   NZ_CP130528
Coordinates   1929994..1930734 (-) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SA18-SX     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1924994..1935734
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3V90_RS09335 hemH 1925871..1926794 (-) 924 WP_000162888.1 ferrochelatase -
  Q3V90_RS09340 hemE 1926852..1927889 (-) 1038 WP_000233540.1 uroporphyrinogen decarboxylase -
  Q3V90_RS09345 - 1927879..1927965 (-) 87 WP_031875110.1 hypothetical protein -
  Q3V90_RS09350 traP 1928151..1928654 (+) 504 WP_000737983.1 signal transduction protein TRAP -
  Q3V90_RS09355 - 1928778..1930001 (-) 1224 WP_001245766.1 ABC transporter permease -
  Q3V90_RS09360 pptA 1929994..1930734 (-) 741 WP_000216874.1 ABC transporter ATP-binding protein Regulator
  Q3V90_RS09365 - 1930868..1931290 (+) 423 WP_000004981.1 HIT family protein -
  Q3V90_RS09370 - 1931432..1931797 (+) 366 WP_000648118.1 YtxH domain-containing protein -
  Q3V90_RS09375 - 1932530..1933087 (+) 558 WP_000477959.1 DUF3267 domain-containing protein -
  Q3V90_RS09380 - 1933292..1934254 (+) 963 WP_000782119.1 foldase protein PrsA -
  Q3V90_RS09385 yhaM 1934375..1935316 (-) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=784247 Q3V90_RS09360 WP_000216874.1 1929994..1930734(-) (pptA) [Staphylococcus aureus strain SA18-SX]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=784247 Q3V90_RS09360 WP_000216874.1 1929994..1930734(-) (pptA) [Staphylococcus aureus strain SA18-SX]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATCGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACCGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545