Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   Q3V57_RS09590 Genome accession   NZ_CP130525
Coordinates   1962695..1963513 (-) Length   272 a.a.
NCBI ID   WP_001124422.1    Uniprot ID   P66002
Organism   Staphylococcus aureus strain SA20-SX     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1957695..1968513
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3V57_RS09570 - 1958788..1959765 (+) 978 WP_000379098.1 metal-dependent hydrolase -
  Q3V57_RS09575 - 1960026..1960862 (-) 837 WP_000886466.1 membrane protein -
  Q3V57_RS09580 - 1960871..1962388 (-) 1518 WP_000535828.1 ABC transporter ATP-binding protein -
  Q3V57_RS09585 - 1962403..1962717 (-) 315 WP_000435806.1 YfhH family protein -
  Q3V57_RS09590 recX 1962695..1963513 (-) 819 WP_001124422.1 recombination regulator RecX Regulator
  Q3V57_RS09595 sgtB 1963774..1964583 (-) 810 WP_000830378.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  Q3V57_RS09600 - 1964924..1965439 (-) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  Q3V57_RS09605 - 1965570..1965731 (-) 162 WP_001005407.1 SE1561 family protein -
  Q3V57_RS09610 - 1966078..1966158 (+) 81 WP_100250272.1 hypothetical protein -
  Q3V57_RS09615 - 1966271..1966885 (-) 615 WP_000051376.1 hypothetical protein -
  Q3V57_RS09620 - 1966882..1967058 (-) 177 WP_000201922.1 hypothetical protein -
  Q3V57_RS09625 - 1967524..1968279 (-) 756 WP_000861038.1 CHAP domain-containing protein -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32259.10 Da        Isoelectric Point: 5.9211

>NTDB_id=784067 Q3V57_RS09590 WP_001124422.1 1962695..1963513(-) (recX) [Staphylococcus aureus strain SA20-SX]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=784067 Q3V57_RS09590 WP_001124422.1 1962695..1963513(-) (recX) [Staphylococcus aureus strain SA20-SX]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAACAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P66002

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.632

100

0.996