Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   JLH17_RS07800 Genome accession   NZ_AP022498
Coordinates   1660861..1661487 (+) Length   208 a.a.
NCBI ID   WP_032637053.1    Uniprot ID   A0AAJ6MNH4
Organism   Enterobacter kobei strain STN0717-53     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1655861..1666487
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JLH17_RS07780 (STN0717ENT53_15200) - 1656259..1658019 (-) 1761 WP_014883250.1 Lon protease family protein -
  JLH17_RS07785 (STN0717ENT53_15210) matP 1658206..1658658 (+) 453 WP_023332611.1 macrodomain Ter protein MatP -
  JLH17_RS07790 (STN0717ENT53_15220) ompA 1658723..1659778 (-) 1056 WP_014883252.1 porin OmpA -
  JLH17_RS07795 (STN0717ENT53_15230) sulA 1660134..1660643 (-) 510 WP_014883253.1 SOS-induced cell division inhibitor SulA -
  JLH17_RS07800 (STN0717ENT53_15240) sxy/tfoX 1660861..1661487 (+) 627 WP_032637053.1 TfoX/Sxy family DNA transformation protein Regulator
  JLH17_RS07805 (STN0717ENT53_15250) yccS 1661444..1663606 (-) 2163 WP_023332614.1 YccS family putative transporter -
  JLH17_RS07810 (STN0717ENT53_15260) - 1663626..1664072 (-) 447 WP_014883256.1 YccF domain-containing protein -
  JLH17_RS07815 (STN0717ENT53_15270) helD 1664196..1666250 (+) 2055 WP_045269354.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23930.53 Da        Isoelectric Point: 9.0691

>NTDB_id=78345 JLH17_RS07800 WP_032637053.1 1660861..1661487(+) (sxy/tfoX) [Enterobacter kobei strain STN0717-53]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAIDDAVFAMVSDGELYLRACEESAKYCVKNAASFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALNAARKERCQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARECWLKMRAKN
RALGIKVLFALEGAIEGLHEAALPAGTRRELTEWFNALPEPQKNHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=78345 JLH17_RS07800 WP_032637053.1 1660861..1661487(+) (sxy/tfoX) [Enterobacter kobei strain STN0717-53]
ATGAAAAAGATATCTTATGAACGGATTTATCAATCCCAGGAATACCTCTCACCGCTAGGAGAAATTCATCATCGCGCACT
GTTCGGTGGCTATACCCTGGCGATAGATGACGCGGTTTTTGCCATGGTGTCAGATGGCGAGCTGTACCTTCGCGCCTGTG
AAGAAAGCGCGAAATACTGTGTAAAAAATGCCGCCTCTTTTTTGACGCTGATGAAACGAGGCCGCCCGGTACTTCTCAAC
TATTACCGTGTCGATGATGGACTGTGGCAAGACAGGGAACGGCTGCTTCAGCTCTCTTCTTTCGCGCTCAATGCGGCGAG
GAAAGAGCGCTGTCAGCGCCATCAACGAAACCGGCTTAAAGATCTGCCAAACCTGACCTTTCAGCTTGAGGTATTACTTT
TTGAAGCTGGCATTACTAACGAAGAGACGCTGCGGGCACTGGGTGCCAGGGAGTGCTGGTTAAAGATGCGGGCTAAAAAT
AGGGCACTCGGTATTAAAGTGCTCTTCGCCCTTGAGGGGGCTATTGAGGGTTTGCATGAGGCGGCACTCCCGGCAGGCAC
TCGCCGGGAGTTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGAAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

57.143

97.596

0.558

Multiple sequence alignment