Detailed information NTG0783346

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: MGCS36044_RS09410
• Genome accession: NZ_CP117287
• Coordinates: 1904714..1905646 (-)
• Length: 310 a.a.
• NCBI ID: WP_003060110.1
• Uniprot ID: A0A9X8T5Q4
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain MGCS36044
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1899714..1910646

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MGCS36044_RS09385 (MGCS36044_03778)	tsaD	1900204..1901220 (-)	1017	WP_084916686.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
MGCS36044_RS09390 (MGCS36044_03780)	rimI	1901210..1901635 (-)	426	WP_003056684.1	ribosomal protein S18-alanine N-acetyltransferase	-
MGCS36044_RS09395 (MGCS36044_03782)	tsaB	1901637..1902335 (-)	699	WP_065358518.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
MGCS36044_RS09400 (MGCS36044_03784)	-	1902621..1902851 (+)	231	WP_003056704.1	DNA-dependent RNA polymerase subunit epsilon	-
MGCS36044_RS09405 (MGCS36044_03786)	rnjA	1902853..1904535 (+)	1683	WP_003056700.1	ribonuclease J1	-
MGCS36044_RS09410 (MGCS36044_03788)	amiF	1904714..1905646 (-)	933	WP_003060110.1	ABC transporter ATP-binding protein	Regulator
MGCS36044_RS09415 (MGCS36044_03790)	oppD	1905639..1906691 (-)	1053	WP_012767556.1	ABC transporter ATP-binding protein	Regulator
MGCS36044_RS09420 (MGCS36044_03792)	-	1906703..1907734 (-)	1032	WP_065957283.1	ABC transporter permease	-
MGCS36044_RS09425 (MGCS36044_03794)	-	1907744..1908658 (-)	915	WP_003052794.1	ABC transporter permease	-
MGCS36044_RS09430 (MGCS36044_03796)	-	1908926..1910581 (-)	1656	WP_003058031.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35203.02 Da
• Isoelectric Point: 6.6437

>NTDB_id=783346 MGCS36044_RS09410 WP_003060110.1 1904714..1905646(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS36044]
MNDNRKKLVELKNVSLTFNKGKKNEVKAIDNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDINEGEIIFNGETVSHL
KGKDLRTFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREERVQELLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQHKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLSAIPEPDPDKERQRVADVYDPSQELDGQERQMHEITPGHFVLATQEEADQYRREYH

Nucleotide

• Length: 933 bp

>NTDB_id=783346 MGCS36044_RS09410 WP_003060110.1 1904714..1905646(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS36044]
ATGAATGATAATCGAAAGAAATTAGTAGAGTTAAAAAATGTCTCCTTAACTTTCAATAAGGGAAAGAAAAACGAAGTCAA
AGCCATTGATAATGTGAGCTTTGATATTTATGAAGGGGAAGTGTTTGGACTGGTTGGGGAATCCGGATCAGGAAAAACAA
CTGTTGGTCGCGCCATTTTAAAGCTTTATGATATTAATGAAGGGGAAATTATTTTTAATGGTGAAACCGTTTCTCATTTG
AAAGGGAAAGACTTGCGGACCTTTCGTAAGGATGCTCAGATGATTTTCCAAGATCCTCAGGCTAGTCTTAACGGCCGTAT
GAAAATCAGAGATATTGTGGCAGAAGGGCTAGATATTCATGGACTCACAGCTTCAAAGGCAGAACGAGAAGAACGCGTGC
AAGAACTCCTTGATTTGGTTGGGTTGAACAAGGACCATTTGACACGTTACCCCCATGAATTTTCTGGTGGTCAACGTCAA
CGGATTGGGATTGCCCGTGCTTTGGCAGTTAAACCTAAATTTATCATTGCTGATGAACCTATCTCAGCTCTCGATGTGTC
GATTCAGGCCCAGGTAGTTAACTTGATGCAAAAGCTTCAGCACAAACGTGGATTGACCTATCTTTTTATTGCCCATGACT
TGTCAATGGTCAAATACATTTCTGACCGTATCGGAGTCATGCACTGGGGTAAAATGTTGGAGATTGGGACCTCAGATGAT
GTCTATAATCATCCTATTCATCCTTATACCAAGAGCCTACTCTCGGCTATTCCTGAACCAGATCCAGACAAAGAACGTCA
GCGGGTGGCTGATGTATATGATCCAAGTCAAGAATTGGACGGCCAAGAACGTCAGATGCATGAGATTACGCCAGGCCATT
TTGTCTTAGCTACCCAAGAAGAAGCAGACCAATATCGACGGGAGTATCATTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-268)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.098	98.387	0.532
amiF	Streptococcus thermophilus LMG 18311	53.77	98.387	0.529
amiF	Streptococcus salivarius strain HSISS4	53.443	98.387	0.526