Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   MGCS36083_RS08035 Genome accession   NZ_CP117285
Coordinates   1604925..1605962 (-) Length   345 a.a.
NCBI ID   WP_065957291.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain MGCS36083     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1599925..1610962
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MGCS36083_RS08010 (MGCS36083_03260) - 1599947..1600888 (-) 942 WP_022554979.1 ABC transporter permease subunit -
  MGCS36083_RS08015 (MGCS36083_03262) - 1600890..1602368 (-) 1479 WP_084916587.1 sugar ABC transporter ATP-binding protein -
  MGCS36083_RS08020 (MGCS36083_03264) rbsD 1602384..1602782 (-) 399 WP_003051896.1 D-ribose pyranase -
  MGCS36083_RS08025 (MGCS36083_03266) rbsK 1602757..1603668 (-) 912 WP_003061715.1 ribokinase -
  MGCS36083_RS08030 (MGCS36083_03268) - 1603661..1604644 (-) 984 WP_003053684.1 LacI family DNA-binding transcriptional regulator -
  MGCS36083_RS08035 (MGCS36083_03270) sepM 1604925..1605962 (-) 1038 WP_065957291.1 SepM family pheromone-processing serine protease Regulator
  MGCS36083_RS08040 (MGCS36083_03272) coaD 1605949..1606440 (-) 492 WP_065957290.1 pantetheine-phosphate adenylyltransferase -
  MGCS36083_RS08045 (MGCS36083_03274) rsmD 1606430..1606969 (-) 540 WP_014612463.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  MGCS36083_RS08050 (MGCS36083_03276) asnA 1607204..1608196 (-) 993 WP_003061055.1 aspartate--ammonia ligase -
  MGCS36083_RS08055 (MGCS36083_03278) arcC 1608523..1609473 (-) 951 WP_046178063.1 carbamate kinase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37617.20 Da        Isoelectric Point: 9.4270

>NTDB_id=783220 MGCS36083_RS08035 WP_065957291.1 1604925..1605962(-) (sepM) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS36083]
MKTIKKIKWWLISLIALVALLIVLFFPLPYYVEMPGGAYDIRTVVKVNGKEDKDKGSYQFVAVSLSRASLAQLLYAWLTP
FTEISSVEDTTGGYSDADYIRINQFYMETSQNAAVYQALTLADKPVTLDYKGVYVLDISKDSTFKGTLNLADTVTGVNHK
QFTSSTELVDYVSHLKLGDKVTVQFISNSEPKSETGRIIKLKNGKNGIGIALTDHTKVNSAEKIEFSTQGVGGPSAGLMF
TLDIYDQINKEDLRKGRHIAGTGTIGKDGEVGDIGGAGLKVVAAADAGAEIFFVPNNPVDKAVKKANPKAISNYEEAKRA
AKQLKTKMKIVPVTTVQDALAYLRQ

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=783220 MGCS36083_RS08035 WP_065957291.1 1604925..1605962(-) (sepM) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS36083]
ATGAAAACAATTAAAAAAATTAAATGGTGGCTGATTAGCCTAATTGCCCTCGTGGCTCTGCTTATCGTCCTTTTTTTCCC
TCTTCCTTATTATGTTGAAATGCCTGGCGGAGCCTATGACATTCGAACTGTGGTCAAGGTTAATGGCAAAGAAGATAAAG
ATAAAGGCTCCTATCAGTTTGTGGCAGTCAGTCTCAGTCGAGCCAGTTTAGCTCAGTTGCTCTATGCTTGGCTAACCCCT
TTTACTGAAATCAGTTCAGTTGAGGATACCACAGGCGGTTATAGCGATGCAGACTATATCCGCATTAATCAATTCTACAT
GGAAACCTCACAAAATGCTGCGGTCTATCAGGCATTGACCTTGGCAGACAAACCAGTTACTTTGGACTACAAAGGGGTAT
ATGTGTTAGATATTAGCAAGGATTCAACCTTTAAAGGTACTTTAAACTTAGCAGATACGGTAACGGGAGTGAATCACAAA
CAATTTACGAGTTCAACAGAACTTGTGGACTATGTCTCTCATTTAAAACTTGGTGATAAGGTGACTGTGCAGTTTATTAG
TAATAGCGAACCTAAGTCTGAAACAGGTCGTATCATCAAACTAAAAAATGGTAAAAATGGTATCGGCATTGCTTTAACAG
ACCATACTAAAGTCAATTCAGCAGAGAAAATCGAGTTTAGTACCCAAGGTGTTGGGGGTCCTAGCGCAGGCTTAATGTTT
ACATTAGATATCTACGACCAAATTAATAAAGAAGACCTTCGTAAAGGAAGACATATCGCCGGGACAGGAACCATTGGTAA
AGATGGTGAAGTTGGAGATATTGGCGGTGCGGGTCTTAAGGTCGTTGCTGCTGCAGATGCTGGTGCTGAGATTTTCTTTG
TGCCGAATAATCCTGTGGATAAAGCTGTTAAAAAAGCCAATCCAAAAGCTATTAGCAATTATGAAGAGGCCAAGCGAGCA
GCCAAGCAGTTAAAAACAAAAATGAAAATTGTTCCTGTAACAACTGTTCAGGATGCCCTAGCCTACCTTCGTCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

71.304

100

0.713