Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   MGCS36089_RS03060 Genome accession   NZ_CP117284
Coordinates   569267..570076 (+) Length   269 a.a.
NCBI ID   WP_003059746.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain MGCS36089     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 564267..575076
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MGCS36089_RS03035 (MGCS36089_01218) - 564640..565341 (-) 702 WP_003057191.1 amino acid ABC transporter permease -
  MGCS36089_RS03040 (MGCS36089_01220) - 565355..566155 (-) 801 WP_003057243.1 transporter substrate-binding domain-containing protein -
  MGCS36089_RS03045 (MGCS36089_01222) - 566155..566949 (-) 795 WP_084916254.1 amino acid ABC transporter ATP-binding protein -
  MGCS36089_RS03050 (MGCS36089_01224) vicR 567208..567918 (+) 711 WP_084916255.1 response regulator YycF Regulator
  MGCS36089_RS03055 (MGCS36089_01226) vicK 567911..569263 (+) 1353 WP_084916257.1 cell wall metabolism sensor histidine kinase VicK Regulator
  MGCS36089_RS03060 (MGCS36089_01228) vicX 569267..570076 (+) 810 WP_003059746.1 MBL fold metallo-hydrolase Regulator
  MGCS36089_RS03065 (MGCS36089_01230) rnc 570834..571526 (+) 693 WP_003057240.1 ribonuclease III -
  MGCS36089_RS03070 (MGCS36089_01232) smc 571527..575072 (+) 3546 WP_046177372.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30157.38 Da        Isoelectric Point: 6.0739

>NTDB_id=783147 MGCS36089_RS03060 WP_003059746.1 569267..570076(+) (vicX) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS36089]
MIESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQLMDERNMLGKLDASQKHIFQRDKMLTFGDVDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDMGHLSNEDGAGAMIRSLGHKTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=783147 MGCS36089_RS03060 WP_003059746.1 569267..570076(+) (vicX) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS36089]
ATGATTGAAAGTGGTTTTAAATACAGTATTTTAGCATCCGGATCCACAGGCAATTGTTTTTATTTAGAAACACCTAAAAA
GCGATTATTAATTGACGCAGGGTTGACTGGTAAGAAAATCACCAGTCTCCTTGCTGAAATTGACCGCAAGCCTGAAGATT
TAGATGCTATTTTGATTACACATGAACATTCAGATCATATCAAGGGAGTGGGAGTGATGGCTCGCAAGTACCATTTGGAT
GTTTATGCCAACGAAAAAACATGGCAGTTGATGGATGAGCGTAATATGCTCGGGAAGCTTGATGCCTCCCAAAAACATAT
TTTCCAAAGAGATAAGATGTTGACCTTTGGAGATGTTGACATTGAAAGTTTTGGCGTTAGTCACGATGCGGTTGATCCTC
AGTTTTACCGCATTATGAAGGACAACAAATCGTTTGTGATGCTGACTGATACAGGTTATGTCAGTGACCGAATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAGTCCAATCATGACATTGAAATTTTACGGTCGGGTTCTTACCCTTGGAG
TTTAAAACAACGCATTTTGTCAGACATGGGCCATTTGTCAAATGAAGATGGCGCTGGAGCTATGATTAGAAGTTTAGGGC
ATAAGACCAAAAAAATCTATTTGGGCCATTTGAGTAAAGAAAATAACATCAAAGAGTTGGCTCACATGACCATGGTGAAC
CAATTAGCCATGGCAGATTTAGCGGTAGGTACAGACTTTACTGTTCATGACACTTCCCCAGACACAGCTTGTCCCTTGAC
GGATATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-217)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.58

100

0.766