Detailed information NTG0782698

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PQV96_RS15425
• Genome accession: NZ_CP117193
• Coordinates: 3282286..3283602 (+)
• Length: 438 a.a.
• NCBI ID: WP_273623470.1
• Uniprot ID: -
• Organism: Acidovorax temperans strain LMJ
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3277286..3288602

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PQV96_RS15400 (PQV96_15400)	-	3277497..3277736 (-)	240	WP_370541244.1	hypothetical protein	-
PQV96_RS15405 (PQV96_15405)	coaD	3278048..3278548 (-)	501	WP_044398053.1	pantetheine-phosphate adenylyltransferase	-
PQV96_RS15410 (PQV96_15410)	rsmD	3278708..3279403 (-)	696	WP_273623463.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PQV96_RS15415 (PQV96_15415)	-	3279400..3280761 (-)	1362	WP_273623466.1	M16 family metallopeptidase	-
PQV96_RS15420 (PQV96_15420)	-	3280782..3282257 (-)	1476	WP_273623468.1	M16 family metallopeptidase	-
PQV96_RS15425 (PQV96_15425)	pilA	3282286..3283602 (+)	1317	WP_273623470.1	signal recognition particle-docking protein FtsY	Machinery gene
PQV96_RS15430 (PQV96_15430)	-	3283743..3286388 (+)	2646	WP_273623472.1	EAL domain-containing protein	-
PQV96_RS15435 (PQV96_15435)	-	3286592..3287686 (-)	1095	WP_207373515.1	ornithine cyclodeaminase	-
PQV96_RS15440 (PQV96_15440)	-	3287811..3288230 (+)	420	WP_066785559.1	Lrp/AsnC family transcriptional regulator	-

Sequence

Protein

• Length: 438 a.a.
• Molecular weight: 45024.88 Da
• Isoelectric Point: 5.7756

>NTDB_id=782698 PQV96_RS15425 WP_273623470.1 3282286..3283602(+) (pilA) [Acidovorax temperans strain LMJ]
MFSFFKKKPAPPPAVADAPAPAPAPVTPPPATPAPIEAAAPPAAAPATGSFGWLRNPFSAKPPASAPAPTPTPAVDAAPV
EPAPVAPPVAPPVQPAVTVAKEAAPAPAPVAPPVVPAPVFAPAPSPAPEPVAAPAPVVAERKGWLDRLKAGLRKTGSSIA
TVFTGTQIDDALYEELEEALLMADTGVKATQHLLEDLKRRVKETKTTDPAAVKGLLADALADLLRPLEKALVIGEHTPTV
IMVAGVNGAGKTTSIGKLTKHLANEGASVLLAAADTFRAAAREQLGVWADRNTVEIVSQEGGDPAAVSFDAVTAGRARGK
DVVLVDTAGRLPTQLHLMEELKKIRRVVTKADATAPHEVLLVIDGNTGQNALAQVRAFDDALQLTGLVVTKLDGTAKGGV
LAALAQERPIPVYFIGVGEKLEDLETFNAREFAQALLS

Nucleotide

• Length: 1317 bp

>NTDB_id=782698 PQV96_RS15425 WP_273623470.1 3282286..3283602(+) (pilA) [Acidovorax temperans strain LMJ]
ATGTTCAGTTTTTTTAAGAAAAAGCCCGCCCCCCCGCCCGCAGTCGCTGATGCCCCGGCACCCGCGCCCGCGCCCGTGAC
GCCCCCGCCAGCCACGCCCGCCCCCATTGAAGCCGCCGCGCCCCCCGCCGCCGCCCCGGCCACAGGCAGCTTTGGCTGGC
TGCGCAACCCGTTTTCCGCCAAGCCCCCCGCCAGCGCCCCTGCGCCCACACCCACGCCTGCCGTGGATGCCGCGCCCGTG
GAGCCAGCCCCGGTCGCCCCGCCCGTTGCGCCCCCTGTGCAGCCGGCGGTTACCGTGGCGAAGGAAGCCGCCCCGGCGCC
CGCCCCGGTCGCCCCTCCTGTGGTGCCAGCGCCTGTCTTTGCGCCAGCGCCCTCACCGGCACCAGAACCCGTTGCTGCCC
CAGCCCCCGTGGTAGCGGAACGCAAAGGTTGGCTTGACCGCCTGAAAGCGGGCTTGCGCAAGACCGGCTCCAGCATCGCC
ACCGTGTTCACCGGCACGCAAATCGACGATGCGCTGTACGAAGAGCTGGAAGAAGCCCTGCTGATGGCCGACACGGGCGT
GAAGGCCACCCAGCACCTGCTGGAAGACCTCAAGCGCCGCGTGAAGGAAACCAAGACCACCGACCCCGCCGCCGTGAAGG
GCCTGCTGGCCGACGCGCTGGCAGACTTGCTGCGTCCCCTGGAAAAAGCCCTGGTGATTGGCGAGCACACGCCCACCGTC
ATCATGGTGGCTGGTGTCAACGGTGCAGGCAAAACCACGTCGATTGGCAAGCTCACCAAGCACCTGGCCAATGAAGGGGC
CAGCGTGCTGCTGGCCGCAGCCGACACCTTCCGCGCCGCAGCGCGCGAACAGCTGGGCGTGTGGGCCGACCGCAATACCG
TCGAGATCGTGAGCCAGGAAGGCGGCGACCCCGCTGCCGTGAGCTTTGACGCCGTGACCGCCGGCAGGGCCCGTGGCAAG
GACGTGGTGCTGGTAGACACCGCAGGGCGCCTGCCCACCCAGCTGCACCTGATGGAGGAGCTGAAAAAGATCCGCCGCGT
GGTGACCAAAGCCGACGCCACCGCCCCGCACGAGGTGCTGCTGGTGATTGACGGCAACACCGGCCAGAACGCGCTGGCAC
AGGTGCGCGCTTTTGACGATGCACTGCAGCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCCAAGGGGGGCGTG
CTGGCCGCGCTTGCGCAGGAACGCCCCATCCCCGTGTATTTCATCGGTGTGGGCGAGAAGCTGGAAGACCTGGAAACCTT
CAACGCGCGCGAGTTCGCGCAGGCCCTGCTGTCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (238-437)

• SRP54-type protein, helical bundle domain (SRP54_N) (157-220)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.416	100	0.489