Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   SAJP025_RS02165 Genome accession   NZ_AP025683
Coordinates   474448..475251 (+) Length   267 a.a.
NCBI ID   WP_001134201.1    Uniprot ID   -
Organism   Staphylococcus aureus strain JP025     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 469448..480251
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAJP025_RS02145 (SAJP025_04050) - 470994..472331 (+) 1338 WP_000812850.1 aminotransferase class V-fold PLP-dependent enzyme -
  SAJP025_RS02150 (SAJP025_04060) tmk 472333..472950 (+) 618 WP_001272126.1 dTMP kinase -
  SAJP025_RS02155 (SAJP025_04070) - 472978..473307 (+) 330 WP_000781979.1 cyclic-di-AMP receptor -
  SAJP025_RS02160 (SAJP025_04080) - 473521..474447 (+) 927 WP_000344324.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  SAJP025_RS02165 (SAJP025_04090) yaaT 474448..475251 (+) 804 WP_001134201.1 stage 0 sporulation family protein Regulator
  SAJP025_RS02170 (SAJP025_04100) yabA 475268..475615 (+) 348 WP_000375686.1 DNA replication initiation control protein YabA -
  SAJP025_RS02175 (SAJP025_04110) - 475889..476614 (+) 726 WP_000910695.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  SAJP025_RS02180 (SAJP025_04120) - 476607..476855 (+) 249 WP_000377064.1 GIY-YIG nuclease family protein -
  SAJP025_RS02185 (SAJP025_04130) rsmI 476857..477696 (+) 840 WP_000279925.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  SAJP025_RS02190 (SAJP025_04140) metG 477981..479954 (+) 1974 WP_001051120.1 methionine--tRNA ligase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 30232.89 Da        Isoelectric Point: 4.5801

>NTDB_id=78262 SAJP025_RS02165 WP_001134201.1 474448..475251(+) (yaaT) [Staphylococcus aureus strain JP025]
MPNVIGVQFQKAGKLEYYTPNDIQVELDDWVVVESKRGIEIGIVKNPLMDIAEEDVVLPLKNIIRIADDKDIDKFNCNER
DAENALILCKDIVREQGLDMRLVNCEYTLDKSKVIFNFTADDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGP
CGRSLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQLPDIGEAIETPDGNGKVVALNI
LDISMQVKLEGHEQPLEYKLEEIETMH

Nucleotide


Download         Length: 804 bp        

>NTDB_id=78262 SAJP025_RS02165 WP_001134201.1 474448..475251(+) (yaaT) [Staphylococcus aureus strain JP025]
ATGCCAAATGTAATAGGTGTTCAGTTTCAAAAAGCGGGAAAATTAGAATATTATACACCTAATGATATACAAGTAGAGTT
AGATGACTGGGTAGTTGTCGAATCTAAAAGAGGCATAGAGATAGGTATTGTTAAAAATCCATTAATGGATATTGCTGAAG
AGGATGTTGTGTTACCTCTTAAAAATATTATTCGCATTGCTGATGACAAAGATATTGATAAATTTAATTGTAATGAACGC
GATGCTGAAAATGCATTAATACTATGTAAAGACATTGTAAGAGAACAAGGTTTGGACATGCGTTTAGTCAATTGCGAATA
TACATTAGATAAATCGAAAGTTATTTTTAATTTTACGGCGGATGATCGTATTGATTTTAGAAAATTAGTAAAAATATTAG
CGCAACATTTAAAAACACGTATCGAGTTGAGACAAATTGGTGTAAGGGATGAAGCCAAATTGCTTGGCGGTATCGGACCT
TGTGGTAGATCGTTATGTTGTTCTACATTTTTAGGTGATTTTGAACCAGTATCGATTAAGATGGCTAAGGATCAAAATTT
ATCATTAAATCCAACTAAAATTTCCGGTGCATGTGGTCGTTTGATGTGTTGTTTAAAATATGAAAATGACTATTATGAGG
AAGTACGTGCGCAATTACCTGATATCGGTGAAGCAATTGAAACGCCTGATGGTAACGGGAAAGTAGTTGCTTTAAATATA
TTAGACATTTCTATGCAGGTGAAGCTTGAGGGACATGAACAGCCACTTGAATATAAATTAGAAGAAATAGAAACTATGCA
TTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

63.118

98.502

0.622

Multiple sequence alignment