Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   PQ615_RS02490 Genome accession   NZ_CP117058
Coordinates   531871..532596 (+) Length   241 a.a.
NCBI ID   WP_003101905.1    Uniprot ID   A0A3L8GF06
Organism   Streptococcus iniae strain LSSM211007SI     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 526871..537596
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PQ615_RS02460 (PQ615_02455) - 527001..528461 (+) 1461 WP_304482293.1 NCS2 family permease -
  PQ615_RS02465 (PQ615_02460) tsaE 528555..529004 (+) 450 WP_031239039.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  PQ615_RS02470 (PQ615_02465) - 528991..529521 (+) 531 WP_003101915.1 GNAT family N-acetyltransferase -
  PQ615_RS02475 (PQ615_02470) - 529523..530818 (+) 1296 WP_003101912.1 LCP family protein -
  PQ615_RS02480 (PQ615_02475) - 530955..531257 (-) 303 WP_003101910.1 hypothetical protein -
  PQ615_RS02485 (PQ615_02480) - 531254..531673 (-) 420 WP_003101908.1 HIT family protein -
  PQ615_RS02490 (PQ615_02485) pptA 531871..532596 (+) 726 WP_003101905.1 ABC transporter ATP-binding protein Regulator
  PQ615_RS02495 (PQ615_02490) - 532599..533633 (+) 1035 WP_003101902.1 ABC transporter permease -
  PQ615_RS02500 (PQ615_02495) ccrZ 533694..534485 (+) 792 WP_003101899.1 cell cycle regulator CcrZ -
  PQ615_RS02505 (PQ615_02500) trmB 534485..535123 (+) 639 WP_003101896.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  PQ615_RS02515 (PQ615_02510) - 535294..536067 (-) 774 WP_003101893.1 sulfatase-like hydrolase/transferase -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26959.33 Da        Isoelectric Point: 4.6255

>NTDB_id=782429 PQ615_RS02490 WP_003101905.1 531871..532596(+) (pptA) [Streptococcus iniae strain LSSM211007SI]
MLKIEHLTGGYLNIPVLKDVSFSVEDGQLVGLIGLNGAGKSTTINEIIGLLKPYQGKISIDGLTLDENMAEYRKKIGFIP
ETPSLYEELTLSEHLETIAMAYDIDVKLAMERAKPLLESYRLTDKLDWYPVNFSKGMKQKVMIICAFIIDPSLFILDEPF
LGLDPLAISDLISYLESEKVKGKSILMSTHVLDSAEKMCDRFVILHQGQVRAQGTLEELRQEFAQTGASLNDIYLALTRE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=782429 PQ615_RS02490 WP_003101905.1 531871..532596(+) (pptA) [Streptococcus iniae strain LSSM211007SI]
ATGTTAAAAATTGAACATTTAACAGGAGGTTACCTTAATATTCCTGTTCTTAAAGACGTCAGCTTTTCTGTGGAAGACGG
TCAGCTGGTTGGTTTGATTGGTTTGAATGGTGCAGGTAAATCCACAACCATTAATGAAATCATCGGACTTTTGAAACCCT
ACCAAGGGAAAATCAGCATTGACGGCCTAACCTTAGATGAAAACATGGCAGAATACCGCAAAAAAATTGGTTTTATTCCG
GAAACACCAAGTCTTTATGAAGAACTGACTTTAAGTGAGCACCTTGAAACCATTGCCATGGCCTATGATATTGATGTGAA
ACTAGCCATGGAACGTGCTAAACCACTGCTTGAAAGCTATCGATTAACGGATAAATTAGACTGGTATCCGGTAAATTTTT
CTAAAGGAATGAAGCAAAAAGTCATGATTATTTGTGCTTTTATCATAGACCCAAGCCTCTTTATTTTAGACGAGCCATTT
TTAGGACTTGACCCATTAGCGATCTCAGACTTGATTAGCTACCTTGAAAGTGAAAAAGTTAAAGGCAAATCTATTTTGAT
GAGTACCCATGTCTTAGATTCCGCTGAAAAAATGTGTGATCGTTTTGTCATTTTACATCAGGGACAAGTTAGAGCACAGG
GAACTTTAGAAGAACTCAGACAAGAATTTGCTCAAACTGGAGCAAGCCTTAATGACATCTACCTTGCCTTAACAAGAGAG
GTCTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3L8GF06

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.314

99.17

0.747
  pptA Streptococcus thermophilus LMD-9

74.059

99.17

0.734