Detailed information NTG0782408

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: PQE20_RS19710
• Genome accession: NZ_CP117055
• Coordinates: 602692..603789 (+)
• Length: 365 a.a.
• NCBI ID: WP_050908261.1
• Uniprot ID: -
• Organism: Vibrio harveyi strain VH21FL
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 597692..608789

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PQE20_RS19680 (PQE20_19680)	-	597924..598913 (+)	990	WP_272760384.1	Gfo/Idh/MocA family protein	-
PQE20_RS19685 (PQE20_19685)	-	599055..600392 (-)	1338	WP_050903997.1	MATE family efflux transporter	-
PQE20_RS19690 (PQE20_19690)	-	600516..600830 (-)	315	WP_005453573.1	DUF496 family protein	-
PQE20_RS19695 (PQE20_19695)	-	601069..601272 (+)	204	WP_009696233.1	hypothetical protein	-
PQE20_RS19700 (PQE20_19700)	-	601366..602019 (+)	654	WP_005453575.1	YceH family protein	-
PQE20_RS19705 (PQE20_19705)	-	602016..602342 (+)	327	WP_050908252.1	GIY-YIG nuclease family protein	-
PQE20_RS19710 (PQE20_19710)	luxP	602692..603789 (+)	1098	WP_050908261.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
PQE20_RS19715 (PQE20_19715)	luxQ	603789..606368 (+)	2580	WP_005453581.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	-
PQE20_RS19720 (PQE20_19720)	-	606436..607098 (-)	663	WP_272760385.1	PilZ domain-containing protein	-
PQE20_RS19725 (PQE20_19725)	-	607192..608118 (-)	927	WP_272760386.1	DMT family transporter	-
PQE20_RS19730 (PQE20_19730)	-	608268..608723 (+)	456	WP_005453588.1	Lrp/AsnC family transcriptional regulator	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41548.01 Da
• Isoelectric Point: 6.7059

>NTDB_id=782408 PQE20_RS19710 WP_050908261.1 602692..603789(+) (luxP) [Vibrio harveyi strain VH21FL]
MKKALLFSLISMVGFSPVSHATQVLNGYWGYQEFLDEFPQQRKLTNALAEAVRERPVPLSKNKKRPLKISVVYPGQQVSD
YWVRNIAAFEKRLDKLNINYQINQVFTRPNADIKQQSLSLMEALKSKSDYLIFTLDTTRHRKFVEHVLDSTNTKLILQNI
TTPVREWDKHQPFLYVGFDHAEGSRELATEFGKYFPKHTYYSVLYFSEGYISDVRGDTFIHQVNRDNNFELQSAYYTKAT
KQSGYDAAKASLEKHPDVDFIYACSTDVALGAVEALADLGRSDVMINGWGGGSAELDAIQKGDLDITVMRMNDDTGIAMA
EAIKWDLEGKPVPTVYSGDFEIVTKADSPERIETLKKRAFRYSDN

Nucleotide

• Length: 1098 bp

>NTDB_id=782408 PQE20_RS19710 WP_050908261.1 602692..603789(+) (luxP) [Vibrio harveyi strain VH21FL]
ATGAAAAAAGCGTTACTATTTTCCCTGATTTCTATGGTCGGTTTCTCTCCTGTTTCACATGCAACGCAAGTGCTCAATGG
CTACTGGGGTTATCAAGAGTTCTTGGATGAATTCCCGCAGCAGCGAAAACTCACTAATGCTTTAGCAGAAGCCGTTCGTG
AACGTCCTGTACCATTATCTAAAAACAAAAAGCGTCCGCTTAAAATATCCGTGGTTTATCCGGGGCAGCAAGTATCTGAT
TACTGGGTACGAAACATTGCGGCATTTGAAAAGCGCTTGGACAAGCTAAATATCAACTATCAGATCAACCAAGTTTTCAC
ACGCCCTAATGCGGATATTAAGCAGCAAAGCTTGTCATTAATGGAAGCGCTGAAGAGCAAATCCGATTATTTGATTTTTA
CGTTAGATACAACCAGACACCGCAAATTTGTTGAACACGTTCTTGATTCAACAAACACCAAATTGATCTTACAAAATATC
ACGACACCAGTGCGTGAATGGGATAAACATCAACCGTTTTTATATGTCGGATTTGATCACGCGGAAGGCAGCCGTGAATT
AGCGACAGAATTCGGAAAGTACTTTCCAAAGCACACCTATTACAGTGTGCTCTATTTCTCGGAAGGGTACATTAGTGATG
TGAGAGGTGACACGTTTATTCATCAGGTTAACCGTGATAATAACTTTGAACTACAATCAGCGTACTACACTAAAGCAACA
AAGCAGTCGGGATATGATGCTGCAAAAGCAAGTTTAGAAAAGCACCCAGATGTTGATTTTATTTATGCGTGCTCGACTGA
TGTTGCGTTAGGCGCTGTTGAGGCGTTAGCAGATTTAGGGCGAAGTGATGTTATGATCAACGGTTGGGGCGGTGGTTCAG
CAGAGCTTGACGCTATTCAGAAAGGCGACTTAGATATCACTGTTATGCGTATGAATGATGATACTGGTATCGCCATGGCA
GAAGCCATTAAGTGGGATTTGGAAGGAAAACCTGTCCCAACCGTATATTCCGGTGATTTTGAAATTGTTACCAAAGCTGA
TTCACCGGAAAGAATCGAAACGCTGAAGAAGCGTGCATTTAGATATTCAGATAATTGA

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-324)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	63.462	99.726	0.633