Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   PO908_RS03100 Genome accession   NZ_CP117042
Coordinates   545474..546184 (-) Length   236 a.a.
NCBI ID   WP_021001389.1    Uniprot ID   -
Organism   Streptococcus anginosus strain CGMH_KH1     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 540474..551184
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PO908_RS03085 (PO908_03075) - 540645..541949 (+) 1305 WP_394468072.1 LysM peptidoglycan-binding domain-containing protein -
  PO908_RS03090 (PO908_03080) - 542215..543864 (+) 1650 WP_021001387.1 phosphoenolpyruvate carboxykinase (ATP) -
  PO908_RS03095 (PO908_03085) - 543981..545321 (+) 1341 WP_021001388.1 hemolysin family protein -
  PO908_RS03100 (PO908_03090) treR 545474..546184 (-) 711 WP_021001389.1 trehalose operon repressor Regulator
  PO908_RS03105 (PO908_03095) treP 546363..547854 (+) 1492 Protein_570 PTS system trehalose-specific EIIBC component -
  PO908_RS03110 - 547921..548376 (+) 456 Protein_571 PTS glucose transporter subunit IIA -
  PO908_RS03115 (PO908_03100) - 548583..550214 (+) 1632 WP_081026659.1 alpha,alpha-phosphotrehalase -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27675.76 Da        Isoelectric Point: 9.8121

>NTDB_id=782238 PO908_RS03100 WP_021001389.1 545474..546184(-) (treR) [Streptococcus anginosus strain CGMH_KH1]
MKKYKQIFKLLEQDILNEKYQINDYLPSEHELVQTYKVSRDTIRKSLDLLQKAGLIQKRRGKGSKVIQQEQIDFPVSNLT
SYQELVRQHGMNSKTNVIQLEKITVDKKLSSLTGFPEYRLVWRIIRQRVVDGIASVLDIDYLDKSFVPSINREIAEHSIY
AYLEDELGLHISYAQKEITIDPATNRDKILMNIGNDHHVVSVKSKVYLADGQQFQFTDSRHKLEKFRFVDFSKRQK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=782238 PO908_RS03100 WP_021001389.1 545474..546184(-) (treR) [Streptococcus anginosus strain CGMH_KH1]
ATGAAAAAATATAAACAAATTTTTAAACTCTTAGAACAAGATATTCTAAACGAGAAATATCAGATAAATGATTATCTTCC
TAGCGAACACGAACTTGTCCAGACCTACAAGGTCAGCCGTGACACGATTCGTAAATCGCTTGATTTGCTTCAAAAAGCTG
GTCTCATTCAAAAAAGGAGAGGTAAAGGCTCTAAAGTCATCCAACAAGAACAGATTGACTTTCCCGTTTCCAACCTAACT
AGTTACCAAGAACTTGTCCGGCAACATGGAATGAATTCTAAAACCAATGTCATACAGTTAGAAAAAATTACAGTTGATAA
AAAATTATCCAGTCTTACTGGTTTTCCTGAATACCGTCTGGTGTGGCGGATTATTCGCCAAAGGGTCGTTGACGGGATTG
CCTCCGTCTTGGATATTGATTACCTTGATAAGAGTTTTGTCCCTTCTATTAACCGTGAAATTGCAGAGCATTCAATTTAT
GCTTATTTAGAAGATGAACTGGGACTACACATTTCTTACGCCCAAAAAGAAATCACAATTGATCCAGCCACTAATCGCGA
TAAAATATTGATGAACATTGGAAATGACCACCATGTCGTCTCTGTCAAATCAAAAGTCTATCTTGCAGACGGACAGCAAT
TTCAGTTTACAGATAGTCGTCATAAACTCGAAAAATTCCGTTTCGTTGACTTCTCCAAACGGCAAAAATGA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

63.983

100

0.64