Detailed information NTG0782202

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: Q3B96_RS18650
• Genome accession: NZ_CP130465
• Coordinates: 3602809..3603915 (+)
• Length: 368 a.a.
• NCBI ID: WP_009328417.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain MGMM9
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3597809..3608915

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q3B96_RS18625 (Q3B96_18625)	-	3599185..3599607 (+)	423	WP_009328422.1	SMI1/KNR4 family protein	-
Q3B96_RS18630 (Q3B96_18630)	-	3599648..3600106 (+)	459	WP_009328421.1	SMI1/KNR4 family protein	-
Q3B96_RS18635 (Q3B96_18635)	rok	3600392..3600874 (+)	483	WP_009328420.1	hypothetical protein	Regulator
Q3B96_RS18640 (Q3B96_18640)	-	3600944..3601297 (+)	354	WP_009328419.1	hypothetical protein	-
Q3B96_RS18645 (Q3B96_18645)	-	3601439..3602698 (+)	1260	WP_009328418.1	MFS transporter	-
Q3B96_RS18650 (Q3B96_18650)	rapC	3602809..3603915 (+)	1107	WP_009328417.1	tetratricopeptide repeat protein	Regulator
Q3B96_RS18655 (Q3B96_18655)	-	3603912..3604040 (+)	129	WP_256692922.1	hypothetical protein	-
Q3B96_RS22660	-	3604443..3604526 (-)	84	WP_034291561.1	putative holin-like toxin	-
Q3B96_RS18665 (Q3B96_18665)	-	3604728..3605027 (-)	300	WP_034291560.1	hypothetical protein	-
Q3B96_RS18670 (Q3B96_18670)	-	3605046..3605300 (-)	255	WP_009328416.1	phage holin	-
Q3B96_RS18675 (Q3B96_18675)	-	3605319..3605705 (-)	387	WP_021837858.1	hypothetical protein	-
Q3B96_RS18680 (Q3B96_18680)	-	3605837..3606925 (-)	1089	WP_009328414.1	N-acetylmuramoyl-L-alanine amidase	-
Q3B96_RS18685 (Q3B96_18685)	-	3607076..3607234 (-)	159	WP_009328413.1	hypothetical protein	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 43739.88 Da
• Isoelectric Point: 5.0023

>NTDB_id=782202 Q3B96_RS18650 WP_009328417.1 3602809..3603915(+) (rapC) [Bacillus licheniformis strain MGMM9]
MTTTEIAYEEVANKINQWYTMIKKREIEDAIKLKDEIDCLLDDMEENQNLLLYYNLLDARHKMSVDMFKSSGEILEKIRK
SPEMQKTDDMLQYYFLFFSGQYMFFKKKYIDAINYYKLAEDKLVKIEDEIEKAEFYYHLAISYYYIDQYFFSLAYAEKAL
TIFREFEDYAHRSISSEMILGANKLDLFHYESAYEHYSHALKFAKAKQIPESEGKAYHNLGILYIRRNMLSEAKDCFKNA
LQLQDYIQSINGLKSIYNLTHVLYKSGQIEEAREWYDKGLKRAEKEGDKEYLAKLTLVNTLYDEYNESVLTNSLDILEKL
DLWNDVAELTLEVGCYYKKSDDIKNAAKYLEKCIHARDQILKVTEELK

Nucleotide

• Length: 1107 bp

>NTDB_id=782202 Q3B96_RS18650 WP_009328417.1 3602809..3603915(+) (rapC) [Bacillus licheniformis strain MGMM9]
TTGACAACGACTGAAATTGCATATGAAGAAGTAGCCAATAAGATTAACCAGTGGTATACGATGATTAAAAAGCGTGAAAT
TGAAGATGCCATAAAGTTGAAAGATGAAATTGATTGCTTGTTGGATGATATGGAGGAGAATCAAAATTTGCTCCTTTATT
ACAATCTCTTAGATGCGCGTCACAAGATGTCGGTAGACATGTTTAAGTCGTCAGGGGAAATCCTTGAGAAGATTCGGAAA
AGTCCTGAAATGCAGAAAACGGATGATATGCTCCAATATTATTTTTTGTTTTTCTCTGGTCAATATATGTTTTTCAAAAA
GAAGTACATAGATGCAATTAATTATTACAAATTAGCTGAAGATAAGCTGGTTAAAATTGAAGATGAAATTGAAAAAGCGG
AATTTTATTATCATTTAGCCATATCATATTATTACATTGATCAATATTTCTTCTCATTAGCTTATGCTGAAAAAGCTCTA
ACTATCTTCAGGGAATTTGAAGACTATGCACATAGATCAATTAGCAGTGAAATGATCTTGGGTGCAAATAAACTTGATTT
ATTCCATTATGAATCGGCTTATGAGCATTACAGCCATGCCTTAAAATTTGCAAAGGCTAAGCAGATTCCTGAGTCTGAAG
GAAAGGCATATCATAATCTTGGGATACTCTATATAAGAAGAAACATGCTATCTGAAGCAAAAGACTGTTTTAAAAATGCT
TTGCAGCTTCAAGATTATATCCAAAGCATAAATGGACTTAAATCAATCTATAACCTTACTCATGTCTTGTATAAATCGGG
ACAGATTGAAGAAGCAAGGGAATGGTATGACAAAGGATTGAAACGTGCAGAAAAAGAAGGAGATAAGGAATATTTGGCGA
AACTTACACTTGTTAACACCTTATACGATGAGTACAATGAAAGTGTGTTAACGAATTCCCTTGACATTTTAGAAAAGTTG
GATTTATGGAATGATGTAGCAGAATTGACACTAGAAGTGGGGTGCTACTACAAAAAATCCGATGATATCAAGAATGCAGC
AAAATATCTTGAAAAATGTATTCACGCAAGGGATCAAATTCTAAAAGTGACGGAGGAATTAAAATGA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_8) (333-354)

• MalT-like TPR region (TPR_MalT) (153-285)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-63)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	35.544	100	0.364