Detailed information NTG0782127

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: LYZ37_RS13925
• Genome accession: NZ_CP117029
• Coordinates: 3024283..3025290 (-)
• Length: 335 a.a.
• NCBI ID: WP_004743261.1
• Uniprot ID: A0AAE5GUQ6
• Organism: Vibrio tubiashii strain FP17
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3019283..3030290

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LYZ37_RS13895 (LYZ37_13895)	-	3019808..3020572 (+)	765	WP_045975826.1	succinate dehydrogenase/fumarate reductase iron-sulfur subunit	-
LYZ37_RS13900 (LYZ37_13900)	frdC	3020575..3020958 (+)	384	WP_004743268.1	fumarate reductase subunit FrdC	-
LYZ37_RS13905 (LYZ37_13905)	frdD	3020971..3021348 (+)	378	WP_239866970.1	fumarate reductase subunit FrdD	-
LYZ37_RS13910 (LYZ37_13910)	hslU	3021418..3022752 (-)	1335	WP_272785860.1	HslU--HslV peptidase ATPase subunit	-
LYZ37_RS13915 (LYZ37_13915)	hslV	3022803..3023345 (-)	543	WP_004743263.1	ATP-dependent protease subunit HslV	-
LYZ37_RS13920 (LYZ37_13920)	ftsN	3023616..3024164 (-)	549	WP_272785861.1	cell division protein FtsN	-
LYZ37_RS13925 (LYZ37_13925)	cytR	3024283..3025290 (-)	1008	WP_004743261.1	DNA-binding transcriptional regulator CytR	Regulator
LYZ37_RS13930 (LYZ37_13930)	priA	3025649..3027850 (-)	2202	WP_272785862.1	primosomal protein N'	-
LYZ37_RS13935 (LYZ37_13935)	rpmE	3028134..3028352 (+)	219	WP_004743259.1	50S ribosomal protein L31	-
LYZ37_RS13940 (LYZ37_13940)	-	3028609..3029886 (+)	1278	WP_272785863.1	malic enzyme-like NAD(P)-binding protein	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36874.52 Da
• Isoelectric Point: 6.6018

>NTDB_id=782127 LYZ37_RS13925 WP_004743261.1 3024283..3025290(-) (cytR) [Vibrio tubiashii strain FP17]
MATMKDVAQLAGVSTATVSRALMNPEKVSSATRKRVEDAVLEAGYSPNSLARNLRRNESKTIIAIIPDICDPYYTEIIRG
IEDAAMEHGYIVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQMGHKRIAQISGPETAVLCQFRHQGYQQALRRAGITMNPNYCTSGDFTFEAGAKAIRQLLALPDAPTA
VFCHNDAMAIGAIQEAKKLGLRVPQDLSIVGFDDIHFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TKLVVRESAAPPRVL

Nucleotide

• Length: 1008 bp

>NTDB_id=782127 LYZ37_RS13925 WP_004743261.1 3024283..3025290(-) (cytR) [Vibrio tubiashii strain FP17]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTTTCAACAGCGACAGTATCTAGAGCGCTAATGAATCCAGAAAA
GGTATCGTCAGCGACAAGGAAAAGAGTCGAAGATGCTGTTTTAGAAGCTGGTTATTCACCAAACTCGTTGGCGCGCAACT
TGCGTCGTAACGAATCAAAAACAATCATCGCAATCATTCCAGATATTTGTGATCCCTACTACACCGAGATCATTCGGGGA
ATTGAAGATGCGGCAATGGAGCACGGATACATCGTTTTGCTTGGCGATAGTGGGCAGCAGAAGAAGCGTGAAAGCTCATT
TGTAAACCTAGTATTTACTAAGCAAGCAGATGGTATGTTGCTGCTAGGTACCGATCTTCCTTTTGACGTCAGTAAACCTG
AACAAAAGAACTTACCGCCTATGGTTATGGCTTGTGAGTTTGCCCCCGAACTAGAATTACCTACTGTACATATCGACAAC
CTAACTTCTGCCTTTGAAGCGGTTAACTACCTAACGCAGATGGGTCACAAGCGAATTGCACAAATCTCAGGCCCTGAAAC
AGCGGTTCTATGTCAGTTCCGCCACCAAGGTTATCAGCAGGCACTTAGACGCGCTGGGATCACCATGAACCCGAACTACT
GCACTTCAGGTGATTTCACCTTTGAAGCTGGAGCAAAAGCGATTCGCCAGTTGCTAGCTTTACCAGATGCGCCGACTGCG
GTGTTCTGTCATAACGATGCAATGGCGATTGGTGCGATTCAAGAGGCGAAGAAGCTAGGTTTGCGTGTTCCGCAAGACCT
CTCCATTGTAGGGTTTGATGATATTCACTTTGCTCAATACTGCGATCCACCATTAACGACCATTTCTCAGCCTCGCTATG
AAATTGGCCGCCAAGCAATGCTTATGATGCTTGAGTTGCTACGTGGACATGATGTTCGCGCAGGGTCGAGATTGCTTGAA
ACCAAGCTGGTGGTACGTGAAAGCGCTGCGCCACCAAGAGTGCTTTAG

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	93.072	99.104	0.922
cytR	Vibrio parahaemolyticus RIMD 2210633	88.589	99.403	0.881