Detailed information NTG0782079

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: PPK11_RS05800
• Genome accession: NZ_CP117024
• Coordinates: 1220010..1221449 (+)
• Length: 479 a.a.
• NCBI ID: WP_273896657.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 444A6
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1215010..1226449

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PPK11_RS05780	glmS	1215652..1217445 (-)	1794	WP_273896581.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
PPK11_RS05785	-	1217446..1217685 (-)	240	WP_000461837.1	DUF2443 domain-containing protein	-
PPK11_RS05790	-	1217728..1218270 (-)	543	WP_273896655.1	purine-nucleoside phosphorylase	-
PPK11_RS05795	dnaA	1218422..1219789 (+)	1368	WP_273896656.1	chromosomal replication initiator protein DnaA	-
PPK11_RS05800	comH	1220010..1221449 (+)	1440	WP_273896657.1	competence protein	Machinery gene
PPK11_RS05810	-	1221629..1222381 (+)	753	WP_045004752.1	exodeoxyribonuclease III	-
PPK11_RS05815	-	1222378..1223013 (-)	636	WP_000668050.1	outer membrane protein	-
PPK11_RS05820	-	1223017..1223370 (-)	354	WP_273896658.1	hypothetical protein	-
PPK11_RS05825	recG	1223452..1225323 (+)	1872	WP_273896660.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54761.65 Da
• Isoelectric Point: 6.6636

>NTDB_id=782079 PPK11_RS05800 WP_273896657.1 1220010..1221449(+) (comH) [Helicobacter pylori strain 444A6]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKEAHAHQMPSLNAPMQKPQNKPSSSQQPSQNFSYAEPKLGSKNSKNSLLQPL
AIPSKISPTNEVKTPTNDTKPPLKHSSEDQENNLFITPPTEKTLPNNTSDADTNENNESNENRDNVEKQAIRDPNVKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAVYERPKQDDQVEPTFYETSELAYSSTRKSEITHNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=782079 PPK11_RS05800 WP_273896657.1 1220010..1221449(+) (comH) [Helicobacter pylori strain 444A6]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACTCACATATCCACTGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATCCCTAGAAACACCCAGATTGTTTTTTCTTCAAAAGA
ATTGAAAGAAGCACACGCGCACCAAATGCCTTCTTTAAACGCGCCCATGCAAAAACCACAAAATAAACCTAGCTCATCGC
AACAACCTTCTCAAAACTTTTCTTACGCAGAGCCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GCAATTCCTAGCAAAATAAGCCCCACTAACGAAGTTAAAACGCCAACAAACGACACCAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAACGCCACCCACCGAAAAAACGCTTCCTAACAACACCTCTGACGCTGATACTA
ATGAAAACAATGAAAGCAACGAAAATAGGGATAATGTGGAAAAACAAGCGATTAGAGATCCCAATGTTAAAGAATTTGCA
TGCGGGAAGTGGGTCTATGACGATGAAAACTTGCAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCGACAGACATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCTTATACTAAAA
TCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAATAATTTCGCCATTCTTCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCGCGAAAAGACGGCACGACTAGGCAATGCTATCTAATAGAAGAGCCTTT
AAAACAAGCATGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCGTATATGAACGCCCCAAACAAGATGATC
AAGTAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCACAACGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAGAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGCATTGAAAACTCTCGCGTGGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	96.242	100	0.962