Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | Q3O83_RS06870 | Genome accession | NZ_CP130445 |
| Coordinates | 1312731..1314827 (-) | Length | 698 a.a. |
| NCBI ID | WP_143255905.1 | Uniprot ID | - |
| Organism | Bacillus amyloliquefaciens strain C6.7 | ||
| Function | repress competence development (at the early growth phase) (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1307731..1319827
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Q3O83_RS06845 (Q3O83_06845) | - | 1308320..1308580 (+) | 261 | WP_003154690.1 | aspartyl-phosphate phosphatase Spo0E family protein | - |
| Q3O83_RS06850 (Q3O83_06850) | - | 1308791..1310308 (-) | 1518 | WP_046559543.1 | ATP-binding protein | - |
| Q3O83_RS06855 (Q3O83_06855) | - | 1310507..1310953 (+) | 447 | WP_003154686.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| Q3O83_RS06860 (Q3O83_06860) | motB | 1310989..1311774 (-) | 786 | WP_003154685.1 | flagellar motor protein MotB | - |
| Q3O83_RS06865 (Q3O83_06865) | motA | 1311746..1312561 (-) | 816 | WP_003154684.1 | flagellar motor stator protein MotA | - |
| Q3O83_RS06870 (Q3O83_06870) | clpE | 1312731..1314827 (-) | 2097 | WP_143255905.1 | ATP-dependent protease ATP-binding subunit ClpE | Regulator |
| Q3O83_RS06875 (Q3O83_06875) | - | 1315229..1316266 (+) | 1038 | WP_003154681.1 | membrane protein | - |
| Q3O83_RS06880 (Q3O83_06880) | - | 1316364..1317485 (+) | 1122 | WP_057079971.1 | hypothetical protein | - |
| Q3O83_RS06885 (Q3O83_06885) | queC | 1317735..1318394 (+) | 660 | WP_003154679.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| Q3O83_RS06890 (Q3O83_06890) | queD | 1318395..1318835 (+) | 441 | WP_003154678.1 | 6-carboxytetrahydropterin synthase QueD | - |
| Q3O83_RS06895 (Q3O83_06895) | queE | 1318828..1319559 (+) | 732 | WP_003154676.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
Sequence
Protein
Download Length: 698 a.a. Molecular weight: 77799.86 Da Isoelectric Point: 5.2991
>NTDB_id=781897 Q3O83_RS06870 WP_143255905.1 1312731..1314827(-) (clpE) [Bacillus amyloliquefaciens strain C6.7]
MRCQHCQKNEATIRLNMQVNSIQKQFVLCETCYTELTRKPSMSMGPQSFGFPFEQGFAPNQNKQQAGPEKGLLDELAQNV
TNGAKAGLIDPVIGRDNEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIAEGDVPNKLKNKELYLLDVASLVAN
TGIRGQFEERMKQLMNELKERKNVILFIDEIHLLVGAGSAEGSMDAGNILKPALARGELQVIGATTLKEYRQIEKDAALE
RRFQPVMVHEPTIEQAISILEGIKDKYEKYHGVTFSNEAINACVTLSSRYIQDRHLPDKAIDLLDEAGSKANLELDTVNE
EDAAERLKAIDAEKTKALREENYELAAKLRDEEAALEKQLAHETPASSPEIGAEHIQAIIEQKTGIPVGKLQADEQIKMK
ELEEHLHQRVIGQEKAVKKVAKAVRRSRAGLKSKNRPVGSFLFVGPTGVGKTELSKTLADELFGTKDSIIRLDMSEYMEK
HAVSKIIGSPPGYVGHDEAGQLTEKVRRNPYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVLIMTSNA
GTGEKQVKVGFQSEESVMEEQTLIDSLSAFFKPEFLNRFDSIIEFQSLKKEHLVKIVSLLLTELEDTLKERGISLSVTDD
AKEKIAEIGYHPAFGARPLRRTIQELIEDEMTDLLLDDNEIKAFHVVMEEDGIKVRAQ
MRCQHCQKNEATIRLNMQVNSIQKQFVLCETCYTELTRKPSMSMGPQSFGFPFEQGFAPNQNKQQAGPEKGLLDELAQNV
TNGAKAGLIDPVIGRDNEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIAEGDVPNKLKNKELYLLDVASLVAN
TGIRGQFEERMKQLMNELKERKNVILFIDEIHLLVGAGSAEGSMDAGNILKPALARGELQVIGATTLKEYRQIEKDAALE
RRFQPVMVHEPTIEQAISILEGIKDKYEKYHGVTFSNEAINACVTLSSRYIQDRHLPDKAIDLLDEAGSKANLELDTVNE
EDAAERLKAIDAEKTKALREENYELAAKLRDEEAALEKQLAHETPASSPEIGAEHIQAIIEQKTGIPVGKLQADEQIKMK
ELEEHLHQRVIGQEKAVKKVAKAVRRSRAGLKSKNRPVGSFLFVGPTGVGKTELSKTLADELFGTKDSIIRLDMSEYMEK
HAVSKIIGSPPGYVGHDEAGQLTEKVRRNPYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVLIMTSNA
GTGEKQVKVGFQSEESVMEEQTLIDSLSAFFKPEFLNRFDSIIEFQSLKKEHLVKIVSLLLTELEDTLKERGISLSVTDD
AKEKIAEIGYHPAFGARPLRRTIQELIEDEMTDLLLDDNEIKAFHVVMEEDGIKVRAQ
Nucleotide
Download Length: 2097 bp
>NTDB_id=781897 Q3O83_RS06870 WP_143255905.1 1312731..1314827(-) (clpE) [Bacillus amyloliquefaciens strain C6.7]
ATGCGTTGTCAACATTGTCAGAAAAACGAGGCGACGATTCGCCTGAACATGCAAGTCAATTCCATTCAAAAACAATTCGT
TTTATGTGAAACATGTTATACAGAATTAACCCGAAAACCGTCTATGAGCATGGGGCCGCAATCATTCGGATTCCCGTTTG
AGCAAGGTTTCGCTCCCAATCAAAATAAACAGCAGGCCGGCCCTGAAAAAGGCCTGCTCGACGAGCTCGCTCAAAACGTC
ACAAACGGCGCAAAAGCAGGTCTGATTGACCCTGTGATCGGCCGCGATAATGAAGTGGCGCGCGTAATTGAAATTTTGAA
CCGCCGGAATAAAAACAATCCGGTGCTGATCGGTGAGCCGGGCGTCGGTAAAACGGCTATTGCAGAAGGCCTCGCGCTTA
AAATCGCTGAAGGCGATGTGCCGAACAAATTGAAAAACAAAGAGCTTTACCTGCTTGACGTCGCTTCTCTCGTCGCCAAT
ACAGGGATCAGAGGCCAGTTTGAAGAAAGAATGAAACAATTAATGAACGAATTAAAAGAACGGAAAAATGTCATCTTGTT
CATTGATGAGATTCACCTTCTTGTAGGCGCCGGCTCTGCCGAGGGATCAATGGATGCCGGGAACATCCTGAAACCGGCGC
TTGCCAGAGGCGAGCTGCAGGTCATCGGGGCGACAACGCTGAAAGAGTACCGCCAGATTGAAAAAGATGCGGCGCTTGAA
AGACGCTTCCAGCCTGTCATGGTTCACGAGCCTACAATAGAACAAGCCATCAGCATTCTGGAAGGCATTAAAGATAAATA
CGAGAAATACCACGGCGTCACATTCAGCAATGAAGCGATAAACGCCTGTGTTACGCTTTCATCCCGTTACATTCAGGACC
GCCACCTGCCGGATAAAGCGATCGACTTATTAGATGAAGCCGGCTCTAAGGCGAACCTGGAACTTGATACCGTAAATGAA
GAAGATGCGGCTGAGAGACTCAAAGCAATTGACGCGGAGAAAACAAAAGCGCTTCGGGAAGAAAATTATGAGCTTGCCGC
GAAACTGCGTGATGAAGAAGCGGCTTTGGAAAAGCAGCTGGCGCATGAAACACCGGCCTCTTCACCTGAAATCGGCGCGG
AGCATATTCAAGCCATCATTGAACAGAAAACAGGCATTCCGGTCGGAAAACTCCAGGCTGATGAACAAATCAAAATGAAG
GAACTTGAAGAGCATCTTCATCAGCGTGTCATCGGTCAGGAAAAAGCCGTGAAAAAAGTGGCGAAAGCGGTCAGACGAAG
CCGCGCCGGCTTAAAATCCAAAAACAGACCTGTCGGCTCCTTCCTCTTTGTCGGACCGACCGGAGTCGGAAAAACCGAGT
TATCAAAGACACTCGCAGATGAACTGTTCGGTACAAAAGATTCCATTATCCGTCTCGATATGAGTGAATACATGGAAAAA
CACGCCGTATCAAAAATTATCGGTTCACCGCCGGGATATGTCGGACACGATGAAGCCGGTCAATTAACGGAAAAAGTGCG
CCGCAATCCGTACAGCATCGTGCTGCTCGATGAGATTGAAAAAGCCCACCCTGATGTCCAGCATATGTTTCTGCAGATTA
TGGAGGACGGCCGTCTGACAGACAGCCAGGGCAGAACGGTCAGCTTTAAAGATACCGTTTTGATTATGACAAGCAACGCT
GGAACCGGCGAAAAACAGGTGAAAGTCGGATTCCAATCTGAAGAGAGCGTCATGGAAGAACAAACGCTGATTGATTCACT
GAGCGCGTTCTTCAAACCGGAGTTTTTAAACCGGTTTGACAGCATTATTGAATTCCAATCCCTGAAAAAAGAACATCTCG
TGAAAATCGTCAGCCTGCTTCTCACAGAGCTTGAAGACACATTAAAAGAGCGCGGCATCAGCCTGAGCGTCACCGATGAT
GCGAAGGAAAAAATCGCTGAAATCGGCTACCACCCCGCTTTCGGAGCACGCCCGCTCAGAAGAACCATCCAAGAATTGAT
CGAGGACGAAATGACAGATCTCTTATTGGATGACAACGAAATCAAAGCCTTCCATGTCGTAATGGAAGAGGACGGCATCA
AAGTCCGGGCACAATAA
ATGCGTTGTCAACATTGTCAGAAAAACGAGGCGACGATTCGCCTGAACATGCAAGTCAATTCCATTCAAAAACAATTCGT
TTTATGTGAAACATGTTATACAGAATTAACCCGAAAACCGTCTATGAGCATGGGGCCGCAATCATTCGGATTCCCGTTTG
AGCAAGGTTTCGCTCCCAATCAAAATAAACAGCAGGCCGGCCCTGAAAAAGGCCTGCTCGACGAGCTCGCTCAAAACGTC
ACAAACGGCGCAAAAGCAGGTCTGATTGACCCTGTGATCGGCCGCGATAATGAAGTGGCGCGCGTAATTGAAATTTTGAA
CCGCCGGAATAAAAACAATCCGGTGCTGATCGGTGAGCCGGGCGTCGGTAAAACGGCTATTGCAGAAGGCCTCGCGCTTA
AAATCGCTGAAGGCGATGTGCCGAACAAATTGAAAAACAAAGAGCTTTACCTGCTTGACGTCGCTTCTCTCGTCGCCAAT
ACAGGGATCAGAGGCCAGTTTGAAGAAAGAATGAAACAATTAATGAACGAATTAAAAGAACGGAAAAATGTCATCTTGTT
CATTGATGAGATTCACCTTCTTGTAGGCGCCGGCTCTGCCGAGGGATCAATGGATGCCGGGAACATCCTGAAACCGGCGC
TTGCCAGAGGCGAGCTGCAGGTCATCGGGGCGACAACGCTGAAAGAGTACCGCCAGATTGAAAAAGATGCGGCGCTTGAA
AGACGCTTCCAGCCTGTCATGGTTCACGAGCCTACAATAGAACAAGCCATCAGCATTCTGGAAGGCATTAAAGATAAATA
CGAGAAATACCACGGCGTCACATTCAGCAATGAAGCGATAAACGCCTGTGTTACGCTTTCATCCCGTTACATTCAGGACC
GCCACCTGCCGGATAAAGCGATCGACTTATTAGATGAAGCCGGCTCTAAGGCGAACCTGGAACTTGATACCGTAAATGAA
GAAGATGCGGCTGAGAGACTCAAAGCAATTGACGCGGAGAAAACAAAAGCGCTTCGGGAAGAAAATTATGAGCTTGCCGC
GAAACTGCGTGATGAAGAAGCGGCTTTGGAAAAGCAGCTGGCGCATGAAACACCGGCCTCTTCACCTGAAATCGGCGCGG
AGCATATTCAAGCCATCATTGAACAGAAAACAGGCATTCCGGTCGGAAAACTCCAGGCTGATGAACAAATCAAAATGAAG
GAACTTGAAGAGCATCTTCATCAGCGTGTCATCGGTCAGGAAAAAGCCGTGAAAAAAGTGGCGAAAGCGGTCAGACGAAG
CCGCGCCGGCTTAAAATCCAAAAACAGACCTGTCGGCTCCTTCCTCTTTGTCGGACCGACCGGAGTCGGAAAAACCGAGT
TATCAAAGACACTCGCAGATGAACTGTTCGGTACAAAAGATTCCATTATCCGTCTCGATATGAGTGAATACATGGAAAAA
CACGCCGTATCAAAAATTATCGGTTCACCGCCGGGATATGTCGGACACGATGAAGCCGGTCAATTAACGGAAAAAGTGCG
CCGCAATCCGTACAGCATCGTGCTGCTCGATGAGATTGAAAAAGCCCACCCTGATGTCCAGCATATGTTTCTGCAGATTA
TGGAGGACGGCCGTCTGACAGACAGCCAGGGCAGAACGGTCAGCTTTAAAGATACCGTTTTGATTATGACAAGCAACGCT
GGAACCGGCGAAAAACAGGTGAAAGTCGGATTCCAATCTGAAGAGAGCGTCATGGAAGAACAAACGCTGATTGATTCACT
GAGCGCGTTCTTCAAACCGGAGTTTTTAAACCGGTTTGACAGCATTATTGAATTCCAATCCCTGAAAAAAGAACATCTCG
TGAAAATCGTCAGCCTGCTTCTCACAGAGCTTGAAGACACATTAAAAGAGCGCGGCATCAGCCTGAGCGTCACCGATGAT
GCGAAGGAAAAAATCGCTGAAATCGGCTACCACCCCGCTTTCGGAGCACGCCCGCTCAGAAGAACCATCCAAGAATTGAT
CGAGGACGAAATGACAGATCTCTTATTGGATGACAACGAAATCAAAGCCTTCCATGTCGTAATGGAAGAGGACGGCATCA
AAGTCCGGGCACAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus mutans UA159 |
57.007 |
100 |
0.6 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
56.676 |
100 |
0.596 |
| clpE | Streptococcus pneumoniae Rx1 |
56.267 |
100 |
0.592 |
| clpE | Streptococcus pneumoniae R6 |
56.267 |
100 |
0.592 |
| clpE | Streptococcus pneumoniae D39 |
56.267 |
100 |
0.592 |
| clpE | Streptococcus pneumoniae TIGR4 |
56.267 |
100 |
0.592 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
54.232 |
91.404 |
0.496 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
46.677 |
90.544 |
0.423 |
| clpC | Streptococcus thermophilus LMD-9 |
44.154 |
93.123 |
0.411 |
| clpC | Streptococcus thermophilus LMG 18311 |
43.846 |
93.123 |
0.408 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.88 |
88.682 |
0.407 |
| clpC | Streptococcus pneumoniae Rx1 |
45.88 |
88.682 |
0.407 |
| clpC | Streptococcus pneumoniae D39 |
45.88 |
88.682 |
0.407 |
| clpC | Streptococcus mutans UA159 |
44.553 |
88.109 |
0.393 |